RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ZBED4O75132 1171 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RNASEH2AO75792 299 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SEC31AO94979 1220 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 EPN2O95208 641 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CCNDBP1O95273 360 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CLDN7O95471 211 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SERPINB2P05120 415 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PCNAP12004 261 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PLA2G2AP14555 144 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CHRNB2P17787 502 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 EDN2P20800 178 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SCP2P22307 547 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ICAM3P32942 547 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TTKP33981 857 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RYKP34925 604 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 BSGP35613 385 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ARL3P36405 182 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 GABRB2P47870 512 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PPP3CCP48454 512 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CLCN5P51795 746 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 EFNA5P52803 228 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RARSP54136 660 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NAP1L1P55209 391 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CDH12P55289 794 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CLDN2P57739 230 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ARF3P61204 181 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 OLR1P78380 273 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ARF1P84077 181 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM115Q12893 351 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SLC39A6Q13433 755 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MAMLD1Q13495 774 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CAPSQ13938 189 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 EIF4A2Q14240 407 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RNPS1Q15287 305 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CCNG2Q16589 344 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SLC45A4Q5BKX6 768 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 Q5PR19 223 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 WASHC2DQ5SRD0 308 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SNX30Q5VWJ9 437 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TXNDC8Q6A555 127 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ITPRIPL1Q6GPH6 555 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CLEC4GQ6UXB4 293 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SLC16A12Q6ZSM3 486 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MOB2Q70IA6 237 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TRAPPC11Q7Z392 1133 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 PXKQ7Z7A4 578 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 RBFAQ8N0V3 343 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ADSSL1Q8N142 457 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 BICD2Q8TD16 824 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SMARCE1Q969G3 411 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SLC25A28Q96A46 364 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 ZC3HAV1LQ96H79 300 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MARK4Q96L34 752 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 BBS4Q96RK4 519 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 YME1L1Q96TA2 773 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 BARD1Q99728 777 aaKnown RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 TREX2Q9BQ50 279 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 WDR77Q9BQA1 342 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NUF2Q9BZD4 464 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 LHPPQ9H008 270 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 CDT1Q9H211 546 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 KLHL31Q9H511 634 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 MVB12BQ9H7P6 319 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NCKIPSDQ9NZQ3 722 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 NDRG3Q9UGV2 375 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 FBXO9Q9UK97 447 aaPredicted RBP1.58□□□□□ -2.16
PRPF39-208ENST00000554785 SCINQ9Y6U3 715 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 EVC2Q86UK5 1308 aa1.58□□□□□ -2.16
PRPF39-208ENST00000554785 KDRP35968 1356 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 NRXN2Q9P2S2 1712 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ARFGEF2Q9Y6D5 1785 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 IGLV5-39A0A0G2JS06 123 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ANKRD18BA2A2Z9 1011 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 EIF3CLB5ME19 914 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 USP17L23D6RBM5 183 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 H0YGN5 161 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TAF4O00268 1085 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ATP2C2O75185 946 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TIPRLO75663 272 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SCGB1D1O95968 90 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MT-CYBP00156 380 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TFP02787 698 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TFPIP10646 304 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ACADMP11310 421 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 LAMP2P13473 410 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HOXB2P14652 356 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SRD5A1P18405 259 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 TBXAS1P24557 533 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 NFKBIAP25963 317 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MAPK4P31152 587 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HOXA11P31270 313 aaPredicted RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CXCR3P49682 368 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 RASSF2P50749 326 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 CLNS1AP54105 237 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SELENOVP59797 346 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 LPIN1Q14693 890 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PTGR1Q14914 329 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 DUSP6Q16828 381 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 KLHL24Q6TFL4 600 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PARM1Q6UWI2 310 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms