RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 PCDH12Q9NPG4 1184 aa16.89■□□□□ 0.3
PPP4R3A-202ENST00000554390 GTF2IRD1Q9UHL9 959 aa16.89■□□□□ 0.3
PPP4R3A-202ENST00000554390 EVLQ9UI08 416 aaPredicted RBP16.89■□□□□ 0.3
PPP4R3A-202ENST00000554390 TSR3Q9UJK0 312 aaKnown RBP16.89■□□□□ 0.3
PPP4R3A-202ENST00000554390 USP22Q9UPT9 525 aa16.89■□□□□ 0.3
PPP4R3A-202ENST00000554390 EIF2S1P05198 315 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 CASP2P42575 452 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 TWF2Q6IBS0 349 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 LCN8Q6JVE9 175 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 PARP8Q8N3A8 854 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 LRRC52Q8N7C0 313 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 MINDY2Q8NBR6 621 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 C3orf58Q8NDZ4 430 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 ROPN1LQ96C74 230 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 AKIP1Q9NQ31 210 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 MAP10Q9P2G4 905 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 FNDC3AQ9Y2H6 1198 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 PDE4DIPQ5VU43 2346 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 A0A0G2JLL6 359 aaPredicted RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 A0A1B0GTL3 188 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 NR5A2O00482 541 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 INPP4BO15327 924 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 TREHO43280 583 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 ABCB7O75027 752 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 RSL1D1O76021 490 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 MTHFD1P11586 935 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 LEPRP48357 1165 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 DAOAP59103 153 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 DMPKQ09013 629 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 FAM83EQ2M2I3 478 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 VPS26BQ4G0F5 336 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 HABP4Q5JVS0 413 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 PRRT2Q7Z6L0 340 aaPredicted RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 TFAP2DQ7Z6R9 452 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 CUZD1Q86UP6 607 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 TAC4Q86UU9 113 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 ZFP90Q8TF47 636 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 FUNDC2Q9BWH2 189 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 ADNPQ9H2P0 1102 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 MRPL46Q9H2W6 279 aaKnown RBP16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 C8orf4Q9NR00 106 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 ACTR3BQ9P1U1 418 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 KLQ9UEF7 1012 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 ATP11BQ9Y2G3 1177 aa16.89■□□□□ 0.29
PPP4R3A-202ENST00000554390 LTBP3Q9NS15 1303 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 ARPC2O15144 300 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 STAU1O95793 577 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 RFC2P35250 354 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 FOXA1P55317 472 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 FRG1Q14331 258 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 MAPRE1Q15691 268 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 KIF19Q2TAC6 998 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 GPR158Q5T848 1215 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 SMYD5Q6GMV2 418 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 TBPL2Q6SJ96 375 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 FKBP10Q96AY3 582 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 CDCA5Q96FF9 252 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 TNIP3Q96KP6 325 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 FSD1LQ9BXM9 530 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 NACA2Q9H009 215 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 ING2Q9H160 280 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 ATP13A3Q9H7F0 1226 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 FBXW11Q9UKB1 542 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 BTRCQ9Y297 605 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 ZFC3H1O60293 1989 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 A8MT66 165 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 GPR32O75388 356 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 ALBP02768 609 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 PRSS56P0CW18 603 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 GFAPP14136 432 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 NCK1P16333 377 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 BDNFP23560 247 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 SHMT2P34897 504 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 ARCN1P48444 511 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 CCNA1P78396 465 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 TRIM32Q13049 653 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 FUT11Q495W5 492 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 BTBD8Q5XKL5 378 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 TTC30BQ8N4P2 665 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 OR6J1Q8NGC5 347 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 NT5C3BQ969T7 300 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 NSUN5Q96P11 429 aaKnown RBP16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 TMEM209Q96SK2 561 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 TBL1YQ9BQ87 522 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 ABCD2Q9UBJ2 740 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 MTRRQ9UBK8 725 aa16.88■□□□□ 0.29
PPP4R3A-202ENST00000554390 F8W810 466 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 UGT2B4P06133 528 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 PTPN2P17706 415 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 HNRNPFP52597 415 aaKnown RBP16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 NDUFA5Q16718 116 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 ARL13BQ3SXY8 428 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 OTUD3Q5T2D3 398 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 ESAMQ96AP7 390 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 FAR2Q96K12 515 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 DGCR6LQ9BY27 220 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 CMTM6Q9NX76 183 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms