RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CAMK2BQ13554 666 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 PCSK7Q16549 785 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 ERCC6LQ2NKX8 1250 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 GUSBP11Q6P575 273 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 CDKL3Q8IVW4 592 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 RNF10Q8N5U6 811 aaKnown RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 DCBLD1Q8N8Z6 715 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 ACTL9Q8TC94 416 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 SCAMP4Q969E2 229 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 NXPE2Q96DL1 559 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 RIOK2Q9BVS4 552 aaKnown RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 CDH19Q9H159 772 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 MAGEE1Q9HCI5 957 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 CYP4F12Q9HCS2 524 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 MRPL40Q9NQ50 206 aaKnown RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 NFKBIL1Q9UBC1 381 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 DKK4Q9UBT3 224 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 FAM153AQ9UHL3 310 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 TRHDEQ9UKU6 1024 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 CLCA2Q9UQC9 943 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 SLC17A4Q9Y2C5 497 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-211ENST00000554310 RP1P56715 2156 aa13.01□□□□□ -0.33
SHMT2-211ENST00000554310 CPED1A4D0V7 1026 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 H7C0C1 242 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 OPA1O60313 960 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 PMPCBO75439 489 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 CEACAM5P06731 702 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 IVLP07476 585 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 MYF5P13349 255 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 CD68P34810 354 aaPredicted RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 TNNT3P45378 269 aaPredicted RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 ATP5OP48047 213 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 SPINT3P49223 89 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 CLDN6P56747 220 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 DCDC1P59894 354 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 OTUD4Q01804 1114 aaKnown RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 HENMT1Q5T8I9 393 aaKnown RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 ITPRIPL1Q6GPH6 555 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 CCDC70Q6NSX1 233 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 EFL1Q7Z2Z2 1120 aaKnown RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 LYSMD3Q7Z3D4 306 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 ZNF567Q8N184 647 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 KYQ8NBH2 561 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 SPATA22Q8NHS9 363 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 MAPK15Q8TD08 544 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 FCRL5Q96RD9 977 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 HERPUD2Q9BSE4 406 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 FAM83DQ9H4H8 585 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 CCDC86Q9H6F5 360 aaKnown RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 CARS2Q9HA77 564 aaKnown RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 ZFYVE1Q9HBF4 777 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 RAD18Q9NS91 495 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 TRNAU1APQ9NX07 287 aaKnown RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 MOSPD1Q9UJG1 213 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 GPR34Q9UPC5 381 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 ZNF711Q9Y462 761 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
SHMT2-211ENST00000554310 ARHGEF17Q96PE2 2063 aaPredicted RBP13□□□□□ -0.33
SHMT2-211ENST00000554310 COL27A1Q8IZC6 1860 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-211ENST00000554310 CHD6Q8TD26 2715 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 STK10O94804 968 aaKnown RBP12.99□□□□□ -0.33
SHMT2-211ENST00000554310 FTCDO95954 541 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 MT-CO3P00414 261 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 EPOP01588 193 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 PYGMP11217 842 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 H2AFXP16104 143 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-211ENST00000554310 WNT3AP56704 352 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 ILF3Q12906 894 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHMT2-211ENST00000554310 TARDBPQ13148 414 aaKnown RBP eCLIP12.99□□□□□ -0.33
SHMT2-211ENST00000554310 MPP3Q13368 585 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 TCEA2Q15560 299 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 FAM182AQ5T1J6 154 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 CDCP2Q5VXM1 449 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 KDELC1Q6UW63 502 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 PID1Q7Z2X4 250 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 TAF8Q7Z7C8 310 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 PROSER1Q86XN7 944 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 MARCH9Q86YJ5 346 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 TTC13Q8NBP0 860 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 OR6C4Q8NGE1 309 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 WDR48Q8TAF3 677 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 SCARF2Q96GP6 870 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-211ENST00000554310 COX14Q96I36 57 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 HIC2Q96JB3 615 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 ALS2CR12Q96Q35 445 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 DEPDC7Q96QD5 511 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 GSDMCQ9BYG8 508 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 TMEM168Q9H0V1 697 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 ABCG4Q9H172 646 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 GBA3Q9H227 469 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 UBP1Q9NZI7 540 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 VPS18Q9P253 973 aa12.99□□□□□ -0.33
SHMT2-211ENST00000554310 RSPH14Q9UHP6 348 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms