RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ARMC3Q5W041 872 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 FAM160B1Q5W0V3 765 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KAZNQ674X7 775 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 BORAQ6PGQ7 559 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 IZUMO2Q6UXV1 221 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TMC5Q6UXY8 1006 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CCDC149Q6ZUS6 474 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 MAEAQ7L5Y9 396 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 RFX6Q8HWS3 928 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ZDHHC17Q8IUH5 632 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 NUDCD3Q8IVD9 361 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 LINC01356Q8N9X3 169 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KYQ8NBH2 561 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KCTD6Q8NC69 237 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 OR6Y1Q8NGX8 325 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 RFWD2Q8NHY2 731 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PPP1R14CQ8TAE6 165 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 FAM81AQ8TBF8 368 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ACTRT2Q8TDY3 377 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TRAPPC12Q8WVT3 735 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 RSPH1Q8WYR4 309 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 DLG3Q92796 817 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TTC17Q96AE7 1141 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 FAM111AQ96PZ2 611 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PCYT2Q99447 389 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 YIPF4Q9BSR8 244 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CNPY3Q9BT09 278 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CCDC106Q9BWC9 280 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 MRPL9Q9BYD2 267 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KLHL4Q9C0H6 718 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 S100A14Q9HCY8 104 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ACP6Q9NPH0 428 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 EIF2B3Q9NR50 452 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 NRBP2Q9NSY0 501 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 DLL3Q9NYJ7 618 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PTTG2Q9NZH5 202 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ATXN10Q9UBB4 475 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CHORDC1Q9UHD1 332 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CDH22Q9UJ99 828 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 VPS28Q9UK41 221 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ADAM28Q9UKQ2 775 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PLA2G4CQ9UP65 541 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TBC1D30Q9Y2I9 924 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 HBS1LQ9Y450 684 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CDY1Q9Y6F8 540 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 SPTBN4Q9H254 2564 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 SH3D21A4FU49 640 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SDR42E2A6NKP2 422 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 FAM159BA6NKW6 160 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 KPNA7A9QM74 516 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 HACD1B0YJ81 288 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 TMEM114B3SHH9 223 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 TRIM49D1C9J1S8 452 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SLCO1B7G3V0H7 640 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 OGTO15294 1046 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 DENRO43583 198 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 PI15O43692 258 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 LRCH4O75427 683 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 TMCC1O94876 653 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 STBD1O95210 358 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CXCL14O95715 111 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CCNE2O96020 404 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SERPINE1P05121 402 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CCDC166P0CW27 439 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 PTPN1P18031 435 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 BGNP21810 368 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CA8P35219 290 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ARL2P36404 184 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 FDFT1P37268 417 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ELK3P41970 407 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ALDH7A1P49419 539 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 MECP2P51608 486 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 POLE2P56282 527 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 SESN3P58005 492 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ACTR2P61160 394 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 PRKCEQ02156 737 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ADCY1Q08828 1119 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 BST1Q10588 318 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 CDC16Q13042 620 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 MXD4Q14582 209 aaPredicted RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 UGCGQ16739 394 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF699Q32M78 642 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 KBTBD12Q3ZCT8 623 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 TEX44Q53QW1 395 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 TMEM177Q53S58 311 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ZNF484Q5JVG2 852 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 FNBP1LQ5T0N5 605 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 THEMIS2Q5TEJ8 643 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 BTBD8Q5XKL5 378 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 ZCCHC8Q6NZY4 707 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 KLC3Q6P597 504 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RFWD3Q6PCD5 774 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 DARS2Q6PI48 645 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 C16orf89Q6UX73 402 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RINLQ6ZS11 566 aa5.97□□□□□ -1.45
VPS33B-203ENST00000554264 PRPF39Q86UA1 669 aaKnown RBP5.97□□□□□ -1.45
VPS33B-203ENST00000554264 RASSF3Q86WH2 238 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms