RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 COQ10AQ96MF6 247 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 SMC6Q96SB8 1091 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 OMDQ99983 421 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 ZSCAN5AQ9BUG6 496 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 KDM4CQ9H3R0 1056 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 FAM83DQ9H4H8 585 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 SUDS3Q9H7L9 328 aaPredicted RBP7.62□□□□□ -1.19
TDP1-209ENST00000554180 UGT1A7Q9HAW7 530 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 UGT1A10Q9HAW8 530 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 UGT1A8Q9HAW9 530 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 BPIFA1Q9NP55 256 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 POLMQ9NP87 494 aaPredicted RBP7.62□□□□□ -1.19
TDP1-209ENST00000554180 MKS1Q9NXB0 559 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 BCCIPQ9P287 314 aaKnown RBP eCLIP7.62□□□□□ -1.19
TDP1-209ENST00000554180 MARCH4Q9P2E8 410 aaPredicted RBP7.62□□□□□ -1.19
TDP1-209ENST00000554180 NOVA2Q9UNW9 492 aaKnown RBP7.62□□□□□ -1.19
TDP1-209ENST00000554180 SMG5Q9UPR3 1016 aaKnown RBP7.62□□□□□ -1.19
TDP1-209ENST00000554180 FADS3Q9Y5Q0 445 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 COMMD10Q9Y6G5 202 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 MYLKQ15746 1914 aa7.62□□□□□ -1.19
TDP1-209ENST00000554180 A0A0U1RQS6 177 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 TCRBV21S2A2A0A5A6 115 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 HMX2A2RU54 273 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 OR51F1A6NGY5 319 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 GOLGA8CPA6NN73 597 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 A8MX80 341 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 WNT9AO14904 365 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 PLRG1O43660 514 aaKnown RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 NDUFS3O75489 264 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 RNASEH2AO75792 299 aaKnown RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 MT-ND3P03897 115 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ALDOAP04075 364 aaKnown RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 ACADMP11310 421 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 C6P13671 934 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 NR1D1P20393 614 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CD9P21926 228 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 RPS3P23396 243 aaKnown RBP eCLIP7.61□□□□□ -1.19
TDP1-209ENST00000554180 ACRV1P26436 265 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 GABRB3P28472 473 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CCNFP41002 786 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ETV3P41162 512 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 PTGER3P43115 390 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 MAGEA9P43362 315 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 RPS9P46781 194 aaKnown RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 LIG3P49916 1009 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CSRP3P50461 194 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 SLC18A1P54219 525 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 MPP1Q00013 466 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 POU4F1Q01851 419 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 DPTQ07507 201 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 BMPR2Q13873 1038 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ITIH4Q14624 930 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 UBXN2BQ14CS0 331 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ACOX1Q15067 660 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ZKSCAN8Q15776 578 aaPredicted RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 SMAD1Q15797 465 aaKnown RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 ZNF284Q2VY69 593 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 MAP7D1Q3KQU3 841 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ZRANB3Q5FWF4 1079 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 MROH9Q5TGP6 573 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 KIAA1161Q6NSJ0 714 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 FAM45BPQ6NSW5 357 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 PSAPL1Q6NUJ1 521 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 NEK5Q6P3R8 708 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 TMEM92Q6UXU6 159 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 Q6ZS52 159 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 SH2D5Q6ZV89 423 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 HSD11B1LQ7Z5J1 315 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 EXOC3L1Q86VI1 746 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 LCA5Q86VQ0 697 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 SRRM1Q8IYB3 904 aaKnown RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 PIANPQ8IYJ0 282 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 RBFAQ8N0V3 343 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 SIX5Q8N196 739 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 NXPE1Q8N323 547 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 HDDC3Q8N4P3 179 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 FAM76AQ8TAV0 307 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 FAM45AQ8TCE6 357 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ZNF398Q8TD17 642 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CXorf40AQ8TE69 158 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 HEXDCQ8WVB3 486 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 LPGAT1Q92604 370 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CLDN23Q96B33 292 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 TSPAN17Q96FV3 270 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 MRGPRX1Q96LB2 322 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 VPS35Q96QK1 796 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CHRDQ9H2X0 955 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ASB8Q9H765 288 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CNOT10Q9H9A5 744 aaKnown RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 TBC1D17Q9HA65 648 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 LMAN1LQ9HAT1 526 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 PREBQ9HCU5 417 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 FBXL12Q9NXK8 326 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.61□□□□□ -1.19
TDP1-209ENST00000554180 CRLS1Q9UJA2 301 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 ITM2BQ9Y287 266 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 NCKAP1Q9Y2A7 1128 aa7.61□□□□□ -1.19
TDP1-209ENST00000554180 TTC28Q96AY4 2481 aa7.6□□□□□ -1.19
TDP1-209ENST00000554180 ZNF106Q9H2Y7 1883 aaKnown RBP7.6□□□□□ -1.19
TDP1-209ENST00000554180 COL6A3P12111 3177 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms