RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 COX14Q96I36 57 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 C9orf72Q96LT7 481 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 MCCC1Q96RQ3 725 aaPredicted RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 RANBP9Q96S59 729 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 SLC38A3Q99624 504 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 NAA15Q9BXJ9 866 aaKnown RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 TWSG1Q9GZX9 223 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 ACTL8Q9H568 366 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 AKIRIN1Q9H9L7 192 aaPredicted RBP9□□□□□ -0.97
PRKCH-208ENST00000553846 TBC1D29Q9UFV1 150 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 DNAJC12Q9UKB3 198 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 PCDHB3Q9Y5E6 796 aa9□□□□□ -0.97
PRKCH-208ENST00000553846 TCRBV5S1A1TA0A578 114 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 BICDL2A1A5D9 508 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 NPIPB15A6NHN6 443 aaPredicted RBP8.99□□□□□ -0.97
PRKCH-208ENST00000553846 C21orf140B9A014 251 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 PSMD11O00231 422 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 DNAJC6O75061 913 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 KIAA0754O94854 1291 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 PEX11BO96011 259 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 CYP1A1P04798 512 aaPredicted RBP8.99□□□□□ -0.97
PRKCH-208ENST00000553846 VIPR1P32241 457 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 STX17P56962 302 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 AP1S1P61966 158 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 NSUN2Q08J23 767 aaKnown RBP eCLIP8.99□□□□□ -0.97
PRKCH-208ENST00000553846 CHAF1BQ13112 559 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 STIM1Q13586 685 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 PEX6Q13608 980 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 IL11RAQ14626 422 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.99□□□□□ -0.97
PRKCH-208ENST00000553846 CFAP58Q5T655 872 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 NAA35Q5VZE5 725 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 ZNF517Q6ZMY9 492 aaPredicted RBP8.99□□□□□ -0.97
PRKCH-208ENST00000553846 TSPAN33Q86UF1 283 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 TRIM74Q86UV6 250 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 ELOA2Q8IYF1 753 aaPredicted RBP8.99□□□□□ -0.97
PRKCH-208ENST00000553846 NPWQ8N729 165 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 PRR7Q8TB68 274 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 FNIP1Q8TF40 1166 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 FAM172AQ8WUF8 416 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 CPA5Q8WXQ8 436 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 NCSTNQ92542 709 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 TIGD1Q96MW7 591 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 PSKH2Q96QS6 385 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 SLC25A23Q9BV35 468 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 TBC1D10AQ9BXI6 508 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 EPB41L1Q9H4G0 881 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 UCK1Q9HA47 277 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 LHX9Q9NQ69 397 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 KCTD5Q9NXV2 234 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 SEMA5BQ9P283 1151 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 KCND3Q9UK17 655 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 NOCTQ9UK39 431 aaKnown RBP8.99□□□□□ -0.97
PRKCH-208ENST00000553846 SLC5A6Q9Y289 635 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 TMEM98Q9Y2Y6 226 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 NAV3Q8IVL0 2385 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 SPG11Q96JI7 2443 aa8.99□□□□□ -0.97
PRKCH-208ENST00000553846 TRBV23OR9-2A0A075B6M9 112 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 A0A0U1RQS6 177 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 PIPSLA2A3N6 862 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 TOX3O15405 576 aaPredicted RBP8.98□□□□□ -0.97
PRKCH-208ENST00000553846 KRT86O43790 486 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 SOCS5O75159 536 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 SPAG6O75602 509 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 NDUFA10O95299 355 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 MMEP08473 750 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 CHRNB2P17787 502 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 SDC4P31431 198 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 RFC1P35251 1148 aaPredicted RBP8.98□□□□□ -0.97
PRKCH-208ENST00000553846 RPS18P62269 152 aaKnown RBP8.98□□□□□ -0.97
PRKCH-208ENST00000553846 POLR2LP62875 67 aaKnown RBP8.98□□□□□ -0.97
PRKCH-208ENST00000553846 BCL2L1Q07817 233 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 PAK1Q13153 545 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 NFATC2Q13469 925 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 BIRC2Q13490 618 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 NR6A1Q15406 480 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 ZRANB3Q5FWF4 1079 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 TAF3Q5VWG9 929 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 RAET1GQ6H3X3 334 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 DOK6Q6PKX4 331 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 ARHGAP36Q6ZRI8 547 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 PRSS42Q7Z5A4 293 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 PHLDB2Q86SQ0 1253 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 THAP4Q8WY91 577 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 KLHL6Q8WZ60 621 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 MARVELD3Q96A59 401 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 PNPLA2Q96AD5 504 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 STAMBPL1Q96FJ0 436 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 CCDC34Q96HJ3 373 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 AHCYL2Q96HN2 611 aaKnown RBP8.98□□□□□ -0.97
PRKCH-208ENST00000553846 AGAP2Q99490 1192 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 NUDT9Q9BW91 350 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 UNKQ9C0B0 810 aaKnown RBP8.98□□□□□ -0.97
PRKCH-208ENST00000553846 SLC39A8Q9C0K1 460 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 LUZP4Q9P127 313 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 KLHL3Q9UH77 587 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 CNOT6Q9ULM6 557 aaKnown RBP8.98□□□□□ -0.97
PRKCH-208ENST00000553846 FZD10Q9ULW2 581 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 ENTPD4Q9Y227 616 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 PPIL1Q9Y3C6 166 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms