RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 VIPAS39Q9H9C1 493 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PPCSQ9HAB8 311 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ROPN1Q9HAT0 212 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 PDFQ9HBH1 243 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ARNT2Q9HBZ2 717 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SAYSD1Q9NPB0 183 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ZDHHC18Q9NUE0 388 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ELOVL2Q9NXB9 296 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 SAMD15Q9P1V8 674 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 VPS51Q9UID3 782 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 ERVW-1Q9UQF0 538 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 HS3ST2Q9Y278 367 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 TTLL3Q9Y4R7 772 aa5.05□□□□□ -1.6
VTI1B-202ENST00000553619 NYNRINQ9P2P1 1898 aaKnown RBP5.05□□□□□ -1.6
VTI1B-202ENST00000553619 MYO10Q9HD67 2058 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 MIA3Q5JRA6 1907 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 A0A087WUV0 522 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 OR14I1A6ND48 311 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 GOLGA6L10A6NI86 522 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 E7ESA3 106 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 H3BQ06 376 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 GOLGA8MH3BSY2 632 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 MAN2B1O00754 1011 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 SCAMP3O14828 347 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 PSPNO60542 156 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 SNAP91O60641 907 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 TMCC1O94876 653 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 UBOX5O94941 541 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CRTAMO95727 393 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 NDST3O95803 873 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 PEX11BO96011 259 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 FGF1P05230 155 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 POLBP06746 335 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 SYPP08247 313 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 IMPDH2P12268 514 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 ARSAP15289 507 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 PAMP19021 973 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 HOXA5P20719 270 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 ADRA1DP25100 572 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 SERPINA4P29622 427 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 GJA4P35212 333 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CD86P42081 329 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 EPHB1P54762 984 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 WNT3AP56704 352 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 RPL26P61254 145 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 ARF5P84085 180 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CDK18Q07002 472 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 HTR4Q13639 388 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 STAT4Q14765 748 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 TRADDQ15628 312 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 DLG2Q15700 870 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 MYLK3Q32MK0 819 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 BBS9Q3SYG4 887 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 FBXO43Q4G163 708 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CCDC38Q502W7 563 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 PCID2Q5JVF3 399 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 LGSNQ5TDP6 509 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 FAXCQ5TGI0 409 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CDCP2Q5VXM1 449 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 DENND2CQ68D51 928 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 KCTD11Q693B1 232 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 TRIM68Q6AZZ1 485 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CASC4Q6P4E1 433 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 FBXO38Q6PIJ6 1188 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 NCEH1Q6PIU2 408 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 LRIG3Q6UXM1 1119 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 RANBP10Q6VN20 620 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 C3orf62Q6ZUJ4 267 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CYS1Q717R9 158 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 TRMT11Q7Z4G4 463 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 DSG4Q86SJ6 1040 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 RALGPS2Q86X27 583 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 KLHDC8BQ8IXV7 354 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 ZBED8Q8IZ13 594 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 RYBPQ8N488 228 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 SLC44A3Q8N4M1 653 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 TAB3Q8N5C8 712 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 SH2D3CQ8N5H7 860 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 NETO2Q8NC67 525 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 IPMKQ8NFU5 416 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 OR2AP1Q8NGE2 309 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 OR52K2Q8NGK3 314 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 HCAR2Q8TDS4 363 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CDKL2Q92772 493 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 FGF14Q92915 247 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 RMDN1Q96DB5 314 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 TCTN2Q96GX1 697 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 FEM1CQ96JP0 617 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 LMLNQ96KR4 655 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 DHRS1Q96LJ7 313 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 ZNF641Q96N77 438 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 LRRC3BQ96PB8 259 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 FERD3LQ96RJ6 166 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 EBNA1BP2Q99848 306 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 P2RY13Q9BPV8 354 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 KXD1Q9BQD3 176 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 HEPHQ9BQS7 1158 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 G6PC3Q9BUM1 346 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms