RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 MAP9Q49MG5 647 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 PHF19Q5T6S3 580 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 SPECC1LQ69YQ0 1117 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 KLHL10Q6JEL2 608 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 ENPP7Q6UWV6 458 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 LEKR1Q6ZMV7 388 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 ZNF765Q7L2R6 523 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 RD3Q7Z3Z2 195 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 SLC47A2Q86VL8 602 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 C17orf82Q86X59 251 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 FAM131BQ86XD5 332 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 ZSWIM9Q86XI8 627 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 PLA2G15Q8NCC3 412 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CCL4L1Q8NHW4 92 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 NELFBQ8WX92 580 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 GAL3ST3Q96A11 431 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 MIB2Q96AX9 1013 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CCDC34Q96HJ3 373 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CFAP57Q96MR6 1250 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 WDR92Q96MX6 357 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 GDAP1L1Q96MZ0 367 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 NUDT22Q9BRQ3 303 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CRACR2AQ9BSW2 395 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 TTYH3Q9C0H2 523 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CDH19Q9H159 772 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 NOL6Q9H6R4 1146 aaKnown RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 RDH14Q9HBH5 336 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 SIX2Q9NPC8 291 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM248Q9NWD8 314 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 APEX2Q9UBZ4 518 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM59LQ9UK28 342 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 MAN1B1Q9UKM7 699 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CTNND2Q9UQB3 1225 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 MFHAS1Q9Y4C4 1052 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 CELSR1Q9NYQ6 3014 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 TNRC6AQ8NDV7 1962 aaKnown RBP7.31□□□□□ -1.24
ATXN3-219ENST00000553488 FBN2P35556 2912 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 OTOGQ6ZRI0 2925 aa7.31□□□□□ -1.24
ATXN3-219ENST00000553488 IGHV5-10-1A0A0J9YXX1 117 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 BLACEA4D250 179 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 B4DGG1 531 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 FAM72CH0Y354 149 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 INSIG1O15503 277 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 B4GAT1O43505 415 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 DUX1O43812 170 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 PIGNO95427 931 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 CPNE6O95741 557 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 GNA14O95837 355 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 PCCBP05166 539 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 GM2AP17900 193 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 HTR1BP28222 390 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 CSF2RBP32927 897 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 USP8P40818 1118 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 PPP1R2P41236 205 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 SUOXP51687 545 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 MAZP56270 477 aaKnown RBP7.3□□□□□ -1.24
ATXN3-219ENST00000553488 SNX16P57768 344 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 ELP6Q0PNE2 266 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 MTM1Q13496 603 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 INPP5AQ14642 412 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 C2CD6Q53TS8 623 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 FAM102AQ5T9C2 384 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-219ENST00000553488 FAM72AQ5TYM5 149 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 HIST2H2BCQ6DN03 193 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 ISM2Q6H9L7 571 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 FAM72DQ6L9T8 149 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 DPY19L2P1Q6NXN4 242 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 TTC7BQ86TV6 843 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 FAM72BQ86X60 149 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 NETO2Q8NC67 525 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 RCBTB1Q8NDN9 531 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 ATL2Q8NHH9 583 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 ISL2Q96A47 359 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 FAM81BQ96LP2 452 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 CCDC74BQ96LY2 380 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 MAGEB5Q9BZ81 275 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 KLC2Q9H0B6 622 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM168Q9H0V1 697 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 MAGEH1Q9H213 219 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 RETREG1Q9H6L5 497 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 SYNCQ9H7C4 482 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 CBX8Q9HC52 389 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 PCDH12Q9NPG4 1184 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 MRPL40Q9NQ50 206 aaKnown RBP7.3□□□□□ -1.24
ATXN3-219ENST00000553488 IGSF5Q9NSI5 407 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 TMEM51Q9NW97 253 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 LRIT1Q9P2V4 623 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 LHX3Q9UBR4 397 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 DNAI1Q9UI46 699 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 B3GALT1Q9Y5Z6 326 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 C2CD3Q4AC94 2353 aa7.3□□□□□ -1.24
ATXN3-219ENST00000553488 BICDL2A1A5D9 508 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 GTPBP10A4D1E9 387 aaKnown RBP7.29□□□□□ -1.24
ATXN3-219ENST00000553488 ZSCAN5CA6NGD5 496 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-219ENST00000553488 ZNF891A8MT65 544 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-219ENST00000553488 KDELR3O43731 214 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 RAMP2O60895 175 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 LRIG2O94898 1065 aa7.29□□□□□ -1.24
ATXN3-219ENST00000553488 IGSF6O95976 241 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms