RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TBL1YQ9BQ87 522 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CARD6Q9BX69 1037 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 TDRD1Q9BXT4 1180 aaKnown RBP11.39□□□□□ -0.59
TMEM116-218ENST00000552839 TRIM31Q9BZY9 425 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 RAB17Q9H0T7 212 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 USP29Q9HBJ7 922 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 PCYOX1Q9UHG3 505 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 PPM1HQ9ULR3 514 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 CHKBQ9Y259 395 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 UTP11Q9Y3A2 253 aaKnown RBP11.39□□□□□ -0.59
TMEM116-218ENST00000552839 U3KQA8 63 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 ANKRD36A6QL64 1941 aa11.39□□□□□ -0.59
TMEM116-218ENST00000552839 NAV2Q8IVL1 2488 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 RP1P56715 2156 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 TRPM6Q9BX84 2022 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 A0A1W2PNU3 283 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-218ENST00000552839 FAM187AA6NFU0 413 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 ERI2A8K979 691 aaKnown RBP11.38□□□□□ -0.59
TMEM116-218ENST00000552839 EFCAB8A8MWE9 144 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 K7ENP7 123 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 SLC31A1O15431 190 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 TTI1O43156 1089 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 PCDH8O95206 1070 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 PGLSO95336 258 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 APRTP07741 180 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 ZSCAN5DPP0CG00 497 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 THEGLP0DJG4 465 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 ADRB3P13945 408 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 CR2P20023 1033 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 HLA-DPA1P20036 260 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 CD68P34810 354 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-218ENST00000552839 RPL22P35268 128 aaKnown RBP11.38□□□□□ -0.59
TMEM116-218ENST00000552839 WNT3AP56704 352 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 SKOR1P84550 965 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 CNTN1Q12860 1018 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 TRAF2Q12933 501 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 PTK6Q13882 451 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 ARHGEF7Q14155 803 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 GALNT3Q14435 633 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 SETMARQ53H47 684 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-218ENST00000552839 LRRC73Q5JTD7 316 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 FAM182AQ5T1J6 154 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 KIAA1614Q5VZ46 1190 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 INO80CQ6PI98 192 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-218ENST00000552839 PCGF5Q86SE9 256 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 PRUNE1Q86TP1 453 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 LINC00523Q86TU6 105 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 TTC7BQ86TV6 843 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 PIAS4Q8N2W9 510 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-218ENST00000552839 SLC25A41Q8N5S1 370 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 TMEM145Q8NBT3 493 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 KLK6Q92876 244 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 RAB7BQ96AH8 199 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 ARRDC3Q96B67 414 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 FEM1CQ96JP0 617 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 APOLD1Q96LR9 279 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 MYOCQ99972 504 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 TRIM51Q9BSJ1 452 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 THSD1Q9NS62 852 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 SATB2Q9UPW6 733 aa11.38□□□□□ -0.59
TMEM116-218ENST00000552839 LZTS3O60299 673 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-218ENST00000552839 NDST3O95803 873 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 FGF1P05230 155 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 GP1BAP07359 652 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 CTPS1P17812 591 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 SUOXP51687 545 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 TAS2R38P59533 333 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 RPL26P61254 145 aaKnown RBP11.37□□□□□ -0.59
TMEM116-218ENST00000552839 SEPT6Q14141 434 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 ISXQ2M1V0 245 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 C3orf38Q5JPI3 329 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 IZUMO3Q5VZ72 239 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 IGF2-ASQ6U949 168 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 ZNF572Q7Z3I7 529 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-218ENST00000552839 BBOF1Q8ND07 529 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 OR13H1Q8NG92 308 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 ARRDC2Q8TBH0 407 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 HCAR2Q8TDS4 363 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 OXNAD1Q96HP4 312 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-218ENST00000552839 SLC46A1Q96NT5 459 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 APOL2Q9BQE5 337 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 HDAC8Q9BY41 377 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 ABCG4Q9H172 646 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 ETNK1Q9HBU6 452 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 PREBQ9HCU5 417 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 FZD3Q9NPG1 666 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 NLGN3Q9NZ94 848 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 DKK3Q9UBP4 350 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 PHTF1Q9UMS5 762 aa11.37□□□□□ -0.59
TMEM116-218ENST00000552839 RPL26L1Q9UNX3 145 aaKnown RBP11.37□□□□□ -0.59
TMEM116-218ENST00000552839 AP3B1O00203 1094 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 RAD51CO43502 376 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 RNGTTO60942 597 aaKnown RBP11.36□□□□□ -0.59
TMEM116-218ENST00000552839 METTL18O95568 372 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 AP2A1O95782 977 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 PRKCGP05129 697 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 ELFN1P0C7U0 828 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 ALPPL2P10696 532 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 SEMA5AQ13591 1074 aa11.36□□□□□ -0.59
TMEM116-218ENST00000552839 SPARCL1Q14515 664 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms