RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CTBSQ01459 385 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 DPTQ07507 201 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 MESDQ14696 234 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 CLCA4Q14CN2 919 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 TCEAL1Q15170 157 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 PPP6R3Q5H9R7 873 aaPredicted RBP11.81□□□□□ -0.52
CKAP4-202ENST00000552828 RALGPS1Q5JS13 557 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 HSD11B1LQ7Z5J1 315 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 TECPR1Q7Z6L1 1165 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 TP53INP2Q8IXH6 220 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 NAGSQ8N159 534 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 RCBTB1Q8NDN9 531 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
CKAP4-202ENST00000552828 TEKT4Q8WW24 435 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 SCRN2Q96FV2 425 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 CCDC74BQ96LY2 380 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 MCCC1Q96RQ3 725 aaPredicted RBP11.81□□□□□ -0.52
CKAP4-202ENST00000552828 NUDCD1Q96RS6 583 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 DPYSL5Q9BPU6 564 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 DDA1Q9BW61 102 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 TRIM4Q9C037 500 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 CDH19Q9H159 772 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 SLC25A18Q9H1K4 315 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 ADNPQ9H2P0 1102 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 ZWILCHQ9H900 591 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 NOD2Q9HC29 1040 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 PDP2Q9P2J9 529 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 MOSPD1Q9UJG1 213 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 PHTF1Q9UMS5 762 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 PPIL1Q9Y3C6 166 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
CKAP4-202ENST00000552828 RELNP78509 3460 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 IGHV1OR21-1A0A087WYE8 117 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 TTC24A2A3L6 582 aaPredicted RBP11.8□□□□□ -0.52
CKAP4-202ENST00000552828 B4E171 279 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 PPM1DO15297 605 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 RARAP10276 462 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 THRAP10827 490 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 TCF4P15884 667 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 AK4P27144 223 aaPredicted RBP11.8□□□□□ -0.52
CKAP4-202ENST00000552828 MAN1A1P33908 653 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 ADCY8P40145 1251 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 TSPAN7P41732 249 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 NOP2P46087 812 aaKnown RBP11.8□□□□□ -0.52
CKAP4-202ENST00000552828 GNPDA1P46926 289 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 ATP1A2P50993 1020 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 SLC25A11Q02978 314 aaKnown RBP11.8□□□□□ -0.52
CKAP4-202ENST00000552828 DPYSL2Q16555 572 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 SMTNL2Q2TAL5 461 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 SLC30A9Q6PML9 568 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 ADAMTSL4Q6UY14 1074 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 RAD9BQ6WBX8 426 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 Q6ZVL8 140 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 NLRP8Q86W28 1048 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 PGBD5Q8N414 524 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 PAF1Q8N7H5 531 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 AGBL5Q8NDL9 886 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 HSPH1Q92598 858 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 PMEPA1Q969W9 287 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 MGME1Q9BQP7 344 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 ASPSCR1Q9BZE9 553 aa11.8□□□□□ -0.52
CKAP4-202ENST00000552828 NPIPB15A6NHN6 443 aaPredicted RBP11.79□□□□□ -0.52
CKAP4-202ENST00000552828 H3BRJ5 948 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 MAFKO60675 156 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 PGLSO95336 258 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 SOD1P00441 154 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 CPP00450 1065 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 KRT7P08729 469 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 CYP2A6P11509 494 aaPredicted RBP11.79□□□□□ -0.52
CKAP4-202ENST00000552828 UGT1A3P35503 534 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 ARL4AP40617 200 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 SLC1A1P43005 524 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 FASLGP48023 281 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 POLD2P49005 469 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 GPLD1P80108 840 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 SRSF1Q07955 248 aaKnown RBP eCLIP11.79□□□□□ -0.52
CKAP4-202ENST00000552828 TRAF2Q12933 501 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 KRT81Q14533 505 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 ZNF235Q14590 738 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 NKAIN2Q5VXU1 208 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 TMEM71Q6P5X7 295 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 BORAQ6PGQ7 559 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 TMEM139Q8IV31 216 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 TXLNBQ8N3L3 684 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 PIH1D2Q8WWB5 315 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 PATE1Q8WXA2 126 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 SPRY4Q9C004 299 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.79□□□□□ -0.52
CKAP4-202ENST00000552828 ETNK2Q9NVF9 386 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 TUBD1Q9UJT1 453 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 B3GALT1Q9Y5Z6 326 aa11.79□□□□□ -0.52
CKAP4-202ENST00000552828 ANKRD36A6QL64 1941 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 A0A0A6YYK5 440 aaPredicted RBP11.78□□□□□ -0.52
CKAP4-202ENST00000552828 CAPN5O15484 640 aaPredicted RBP11.78□□□□□ -0.52
CKAP4-202ENST00000552828 FZD6O60353 706 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 CSF2RBP32927 897 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 CSTF2P33240 577 aaKnown RBP eCLIP11.78□□□□□ -0.52
CKAP4-202ENST00000552828 HADHBP55084 474 aaKnown RBP11.78□□□□□ -0.52
CKAP4-202ENST00000552828 CDH6P55285 790 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms