RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 GPAMQ9HCL2 828 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 IL26Q9NPH9 171 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 IGSF5Q9NSI5 407 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 RUVBL2Q9Y230 463 aaKnown RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 FNDC3AQ9Y2H6 1198 aaKnown RBP12.64□□□□□ -0.39
CACNB3-223ENST00000552480 STARD13Q9Y3M8 1113 aa12.64□□□□□ -0.39
CACNB3-223ENST00000552480 ERICH4A6NGS2 130 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 A8MX80 341 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 G3V2L1 256 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 SNX3O60493 162 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 LTA4HP09960 611 aaKnown RBP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 PKMP14618 531 aaKnown RBP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 HNRNPLP14866 589 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 CPA3P15088 417 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 CD9P21926 228 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 RPS3P23396 243 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 ITGB7P26010 798 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 FMO4P31512 558 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 IL12RB1P42701 662 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 PGGT1BP53609 377 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 TIAL1Q01085 375 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 PTSQ03393 145 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 DLG1Q12959 904 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 NFATC2Q13469 925 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 ELAVL3Q14576 367 aaKnown RBP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 CHI3L2Q15782 390 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 CHRNA6Q15825 494 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 FAM83EQ2M2I3 478 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 GPR33Q49SQ1 333 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 LRRC73Q5JTD7 316 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 AGAP9Q5VTM2 703 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 CGB2Q6NT52 195 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 PARS2Q7L3T8 475 aaKnown RBP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 CACNA2D3Q8IZS8 1091 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 GPR26Q8NDV2 337 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 SREK1Q8WXA9 508 aaKnown RBP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 SCYL1Q96KG9 808 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 BIRC8Q96P09 236 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 GPR78Q96P69 363 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 ELAC2Q9BQ52 826 aaKnown RBP12.63□□□□□ -0.39
CACNB3-223ENST00000552480 TSSK1BQ9BXA7 367 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 ASB8Q9H765 288 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 SLCO1B3Q9NPD5 702 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 PCDH12Q9NPG4 1184 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 RAD18Q9NS91 495 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 PKD2L2Q9NZM6 624 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 PPM1HQ9ULR3 514 aa12.63□□□□□ -0.39
CACNB3-223ENST00000552480 COL4A2P08572 1712 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 GRXCR2A6NFK2 248 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 KPNA3O00505 521 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 NPC1O15118 1278 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 VPS26AO75436 327 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 RHOBTB1O94844 696 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 ESR1P03372 595 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 CCDC166P0CW27 439 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 MYL2P10916 166 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 FGF3P11487 239 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 ACRV1P26436 265 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 MMP12P39900 470 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 TNFRSF4P43489 277 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 SOX9P48436 509 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 SPINT3P49223 89 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 SEMG2Q02383 582 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 DMTNQ08495 405 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 SMAD4Q13485 552 aaKnown RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 CTSL3PQ5NE16 218 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 ERAP2Q6P179 960 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 KLC3Q6P597 504 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 FOXR1Q6PIV2 292 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 ZYG11AQ6WRX3 759 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 OTOAQ7RTW8 1153 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 SPATA21Q7Z572 469 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 DSG4Q86SJ6 1040 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 TTC7BQ86TV6 843 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 PIM3Q86V86 326 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 SERPINA9Q86WD7 417 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 SPATS2Q86XZ4 545 aaKnown RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 RBFAQ8N0V3 343 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 FSTL5Q8N475 847 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 PPP1R14CQ8TAE6 165 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 PIP4K2CQ8TBX8 421 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 ZNF398Q8TD17 642 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 HEXDCQ8WVB3 486 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 ARRDC3Q96B67 414 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 PPP1R16AQ96I34 528 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 UBXN10Q96LJ8 280 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 FAM129BQ96TA1 746 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 P2RY13Q9BPV8 354 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 MRPL57Q9BQC6 102 aaKnown RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 P2RY12Q9H244 342 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 MRPL46Q9H2W6 279 aaKnown RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 TAS2R13Q9NYV9 303 aa12.62□□□□□ -0.39
CACNB3-223ENST00000552480 NFKBIL1Q9UBC1 381 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-223ENST00000552480 CRLS1Q9UJA2 301 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 404.8 ms