RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TRAF2Q12933 501 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 MAMLD1Q13495 774 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 DPYSQ14117 519 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 CRTC2Q53ET0 693 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 MARK2Q7KZI7 788 aaKnown RBP14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 ARHGAP22Q7Z5H3 698 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 TECPR1Q7Z6L1 1165 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 TSPAN33Q86UF1 283 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 UNC5BQ8IZJ1 945 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 ESX1Q8N693 406 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 NCSTNQ92542 709 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 PEBP4Q96S96 227 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 MGME1Q9BQP7 344 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 SPRY4Q9C004 299 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 CD84Q9UIB8 345 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 TMEM184BQ9Y519 407 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 KCTD3Q9Y597 815 aa14.1□□□□□ -0.15
CHMP1A-210ENST00000551981 MYO9AB2RTY4 2548 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 PRR19A6NJB7 356 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 H3BRJ5 948 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 POLR1CO15160 346 aaPredicted RBP14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 SOD1P00441 154 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 SLC2A4P14672 509 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 FERP16591 822 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 CTPS1P17812 591 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 MIPP30301 263 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 EPHA4P54764 986 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 CDH6P55285 790 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 C16orf46Q6P387 395 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 TMCO3Q6UWJ1 677 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 ZNF765Q7L2R6 523 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 TIPARPQ7Z3E1 657 aaKnown RBP14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 TRIM74Q86UV6 250 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 PGBD5Q8N414 524 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 ATPAF2Q8N5M1 289 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 EXD1Q8NHP7 514 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 ABCG8Q9H221 673 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 EPB41L1Q9H4G0 881 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 SARS2Q9NP81 518 aaKnown RBP14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 CWC15Q9P013 229 aaKnown RBP14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 PLAAQ9Y263 795 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 PCDHB3Q9Y5E6 796 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 NOTCH2Q04721 2471 aa14.09□□□□□ -0.15
CHMP1A-210ENST00000551981 RP1L1Q8IWN7 2480 aaPredicted RBP14.08□□□□□ -0.15
CHMP1A-210ENST00000551981 UNC79Q9P2D8 2635 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 ASMTLO95671 621 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 PEX11BO96011 259 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 ZNF30P17039 623 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 TNFAIP3P21580 790 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 ARL4AP40617 200 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 STAT5AP42229 794 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 MMP13P45452 471 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 MAPK9P45984 424 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 UBXN1Q04323 297 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 NFATC2Q13469 925 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 MAP7Q14244 749 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 C4orf17Q53FE4 359 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 MARC1Q5VT66 337 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 LRRC66Q68CR7 880 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 PLEKHA7Q6IQ23 1121 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 SLC9B2Q86UD5 537 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 NLRP8Q86W28 1048 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 TP53INP2Q8IXH6 220 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 ARFGAP1Q8N6T3 406 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 AVL9Q8NBF6 648 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 FNIP1Q8TF40 1166 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 MIB2Q96AX9 1013 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 PSMG3-AS1Q96PY0 264 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 HERPUD2Q9BSE4 406 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 CNOT8Q9UFF9 292 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 KLHL3Q9UH77 587 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 ZNHIT2Q9UHR6 403 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 DNPEPQ9ULA0 475 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 PPIL1Q9Y3C6 166 aa14.08□□□□□ -0.16
CHMP1A-210ENST00000551981 TMEM191CA6NGB0 347 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 LGALS16A8MUM7 142 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 TMCO5BA8MYB1 307 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 MKRN2OSH3BPM6 223 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 MAFKO60675 156 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 DLGAP3O95886 979 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 ATP1A3P13637 1013 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 EPHB1P54762 984 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 MAXP61244 160 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 PTPRRQ15256 657 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 CHST15Q7LFX5 561 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 TEX19Q8NA77 164 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 PIH1D2Q8WWB5 315 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 SCAMP4Q969E2 229 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 COX14Q96I36 57 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 LRRC4CQ9HCJ2 640 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 APMAPQ9HDC9 416 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 FANCLQ9NW38 375 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 TAS2R14Q9NYV8 317 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 VPS18Q9P253 973 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 TP53TG5Q9Y2B4 290 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 RPS6KL1Q9Y6S9 549 aa14.07□□□□□ -0.16
CHMP1A-210ENST00000551981 BLACEA4D250 179 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms