RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 PRMT9Q6P2P2 845 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.47
VDR-208ENST00000550325 RPL3LQ92901 407 aaKnown RBP12.08□□□□□ -0.47
VDR-208ENST00000550325 ISL2Q96A47 359 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 FSD1LQ9BXM9 530 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 GPSM3Q9Y4H4 160 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 MAFBQ9Y5Q3 323 aaPredicted RBP12.08□□□□□ -0.47
VDR-208ENST00000550325 NCF1BA6NI72 391 aaPredicted RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 NCF1CA8MVU1 366 aaPredicted RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 ZNF99A8MXY4 864 aaPredicted RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 G3V2T6 193 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 SOAT2O75908 522 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 TOMM70O94826 608 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 NCF1P14598 390 aaPredicted RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 GSTM2P28161 218 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 NPY2RP49146 381 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 CLK3P49761 638 aaKnown RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 ADARB1P78563 741 aaKnown RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 GRM1Q13255 1194 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 SNX17Q15036 470 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 CLPPQ16740 277 aaPredicted RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 FAM214AQ32MH5 1076 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 ZNF789Q5FWF6 425 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 BTBD8Q5XKL5 378 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 LCN8Q6JVE9 175 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 NCLNQ969V3 563 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 ALOXE3Q9BYJ1 711 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 ENPP5Q9UJA9 477 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 UBFD1O14562 309 aaKnown RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 PPEF2O14830 753 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 RFPL2O75678 378 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 NAT1P18440 290 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 GPX3P22352 226 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 GLUD2P49448 558 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 MTPNP58546 118 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 RACK1P63244 317 aaKnown RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 IFITM2Q01629 132 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 PFKFB4Q16877 469 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 ADPRMQ3LIE5 342 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 PLA2G4EQ3MJ16 856 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 GPR158Q5T848 1215 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 IER5Q5VY09 327 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 PPHLN1Q8NEY8 458 aaKnown RBP12.08□□□□□ -0.48
VDR-208ENST00000550325 MCOLN3Q8TDD5 553 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 CITED4Q96RK1 184 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 GAD1Q99259 594 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 SIK2Q9H0K1 926 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 PLEKHA5Q9HAU0 1116 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 CASS4Q9NQ75 786 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 FBXO5Q9UKT4 447 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 SARDHQ9UL12 918 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 INVSQ9Y283 1065 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 CRYL1Q9Y2S2 319 aa12.08□□□□□ -0.48
VDR-208ENST00000550325 ZFC3H1O60293 1989 aaKnown RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 MAGEB16A2A368 324 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 ACKR2O00590 384 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 FTH1P02794 183 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 YBX3P16989 372 aaKnown RBP eCLIP12.07□□□□□ -0.48
VDR-208ENST00000550325 CD40LGP29965 261 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 FOXA1P55317 472 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 OR4D2P58180 307 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 CD47Q08722 323 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 NOMO2Q5JPE7 1267 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 NOL9Q5SY16 702 aaKnown RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 GTF2IRD2BQ6EKJ0 949 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 GTF2IRD2Q86UP8 949 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 OR10Q1Q8NGQ4 319 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 TWIST2Q8WVJ9 160 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 DUS3LQ96G46 650 aaKnown RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 TBCDQ9BTW9 1192 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 YTHDF1Q9BYJ9 559 aaKnown RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 SEMA4BQ9NPR2 832 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 INTS7Q9NVH2 962 aaKnown RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 NSMCE4AQ9NXX6 385 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 FZD10Q9ULW2 581 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 CARD8Q9Y2G2 431 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 CCDC154A6NI56 674 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 ARPP19P56211 112 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 ITKQ08881 620 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 SIM2Q14190 667 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 MXD4Q14582 209 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 TRIP4Q15650 581 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 LY6KQ17RY6 165 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 EFCAB12Q6NXP0 572 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 SLC16A12Q6ZSM3 486 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 P2RY8Q86VZ1 359 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 DNERQ8NFT8 737 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 DEPDC7Q96QD5 511 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 GMIPQ9P107 970 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 LIMD1Q9UGP4 676 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 TSR3Q9UJK0 312 aaKnown RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 AKT3Q9Y243 479 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 CAB39Q9Y376 341 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 PCDHGA11Q9Y5H2 935 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms