RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CDKN2AIPNLQ96HQ2 116 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 ZC3H10Q96K80 434 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 DNAJC1Q96KC8 554 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 SPATA16Q9BXB7 569 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 PARD6BQ9BYG5 372 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 CHRAC1Q9NRG0 131 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 PHPT1Q9NRX4 125 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 TREX1Q9NSU2 369 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 CATSPERZQ9NTU4 200 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 TXNDC16Q9P2K2 825 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 CORO1CQ9ULV4 474 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 ZFR2Q9UPR6 939 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 ITM2BQ9Y287 266 aa9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-206ENST00000549274 A0A087WUV0 522 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 A8MX80 341 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 C10orf142B7Z368 130 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 CACNB4O00305 520 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PLK4O00444 970 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 LILRB5O75023 590 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 AVILO75366 819 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 SRP72O76094 671 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PRAMEF1O95521 474 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PRKCGP05129 697 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 IVLP07476 585 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 GSTM1P09488 218 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PMLP29590 882 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 ETV3P41162 512 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PXNP49023 591 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PMS2P54278 862 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 VSNL1P62760 191 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 RACK1P63244 317 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 GSTM4Q03013 218 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 MGAT5Q09328 741 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 NFATC2Q13469 925 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 GTF2H3Q13889 308 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 ITIH4Q14624 930 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 KLHL38Q2WGJ6 581 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 LYSMD4Q5XG99 296 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 KYAT3Q6YP21 454 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 C3orf62Q6ZUJ4 267 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 Q6ZVL8 140 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 TAOK1Q7L7X3 1001 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 HSD11B1LQ7Z5J1 315 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 GALNT7Q86SF2 657 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 CROCCP2Q86T23 111 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 LRRC6Q86X45 466 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 RGL4Q8IZJ4 473 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 OXR1Q8N573 874 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 OTUD6BQ8N6M0 293 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 GPR150Q8NGU9 434 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 OR4L1Q8NH43 312 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 CEP76Q8TAP6 659 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 DNASE2BQ8WZ79 361 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 SNX19Q92543 992 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 CFAP36Q96G28 342 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 ZNF514Q96K75 400 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 HSPA12BQ96MM6 686 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 TSSK1BQ9BXA7 367 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 ABCG8Q9H221 673 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 WDR26Q9H7D7 661 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 VPS37BQ9H9H4 285 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 C11orf16Q9NQ32 467 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 INTS10Q9NVR2 710 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PIH1D1Q9NWS0 290 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 ZFATQ9P243 1243 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 CRLS1Q9UJA2 301 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 PCDHGA5Q9Y5G8 931 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 CUL9Q8IWT3 2517 aa9.72□□□□□ -0.85
SMARCD1-206ENST00000549274 H3BMM5 538 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 AURKAO14965 403 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 VEGFDO43915 354 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 PAK4O96013 591 aaPredicted RBP9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 ECHS1P30084 290 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 MC4RP32245 332 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 CRADDP78560 199 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 PEX6Q13608 980 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 SIM2Q14190 667 aaPredicted RBP9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 MSS51Q4VC12 460 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 ZRANB3Q5FWF4 1079 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 SEL1L3Q68CR1 1132 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 PNCKQ6P2M8 343 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 TSSK4Q6SA08 328 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 UNC5AQ6ZN44 842 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 KCNMB4Q86W47 210 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 SLC26A11Q86WA9 606 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 ANKMY2Q8IV38 441 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 MREGQ8N565 214 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 MFSD2AQ8NA29 543 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 TP53I13Q8NBR0 393 aaPredicted RBP9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 OR13C4Q8NGS5 318 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 OR13J1Q8NGT2 312 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 ZNF398Q8TD17 642 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 HNRNPLLQ8WVV9 542 aaKnown RBP9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 RLN3Q8WXF3 142 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 GLYATL1Q969I3 302 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 HDAC10Q969S8 669 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 BIRC7Q96CA5 298 aa9.71□□□□□ -0.86
SMARCD1-206ENST00000549274 CERS2Q96G23 380 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms