RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TSTA3Q13630 321 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 FRG1Q14331 258 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 MSANTD2Q6P1R3 559 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 TPGS1Q6ZTW0 290 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 CLYBLQ8N0X4 340 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PCYOX1LQ8NBM8 494 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 EEF1AKMT1Q8WVE0 214 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 ISL2Q96A47 359 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 PBXIP1Q96AQ6 731 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 STARD7Q9NQZ5 370 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 RNF186Q9NXI6 227 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 TRMT6Q9UJA5 497 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 VPS28Q9UK41 221 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 IKZF3Q9UKT9 509 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 ANGPTL3Q9Y5C1 460 aa13.62□□□□□ -0.23
PRPF40B-209ENST00000548825 C7orf72A4D263 438 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 M0QZQ0 153 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 PLOD2O00469 737 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 NPHS1O60500 1241 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 FESP07332 822 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 GNAO1P09471 354 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CAPN3P20807 821 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 IMPDH1P20839 514 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 SLC6A4P31645 630 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 PFKPQ01813 784 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ROR2Q01974 943 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CLCQ05315 142 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 MAPRE2Q15555 327 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 RNF219Q5W0B1 726 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CWF19L1Q69YN2 538 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 SLC22A9Q8IVM8 553 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 GALNT15Q8N3T1 639 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ARRDC2Q8TBH0 407 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 HIC2Q96JB3 615 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CCDC28BQ9BUN5 200 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 SUN2Q9UH99 717 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ASB1Q9Y576 335 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 SYNCRIPO60506 623 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 BCAS2O75934 225 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CYBAP13498 195 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ZNF23P17027 643 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ATP6V1B2P21281 511 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 LEPRP48357 1165 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 UFM1P61960 85 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CAP1Q01518 475 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 RAD51Q06609 339 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ZNF177Q13360 481 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 MAP7Q14244 749 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 NADSYN1Q6IA69 706 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 OR52B6Q8NGF0 335 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CCDC126Q96EE4 140 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CCDC97Q96F63 343 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 TEX37Q96LM6 180 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 UNC93B1Q9H1C4 597 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 PCDHB8Q9UN66 801 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ARHGAP10A1A4S6 786 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 K7ERQ8 282 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ECI2O75521 394 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ZNF37AP17032 561 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 PRDX6P30041 224 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 DGKQP52824 942 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 TPD52P55327 224 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 KCNK10P57789 538 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 GNA12Q03113 381 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 SERINC3Q13530 473 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 MBTPS1Q14703 1052 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 NR6A1Q15406 480 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 OGFRL1Q5TC84 451 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 ANKS6Q68DC2 871 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 FAM45BPQ6NSW5 357 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 IL27RAQ6UWB1 636 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 RNF180Q86T96 592 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 PDZD8Q8NEN9 1154 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 FAM45AQ8TCE6 357 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 RAET1EQ8TD07 263 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 RNF145Q96MT1 663 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 OCEL1Q9H607 264 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 VCX3AQ9NNX9 186 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 RIMS3Q9UJD0 308 aa13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 CNOT6Q9ULM6 557 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-209ENST00000548825 A0A0G2JMZ2 1700 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 LRRC37A2A6NM11 1700 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 KRT87PA6NCN2 255 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 C2orf81A6NN90 581 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 RPP40O75818 363 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 SNUPNO95149 360 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 CD1DP15813 335 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 UGT1A1P22309 533 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 UGT1A4P22310 534 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 UGT1A3P35503 534 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 UGT1A5P35504 534 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 HERVK_113P63132 956 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 PTRHD1Q6GMV3 140 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 UGT2A3Q6UWM9 527 aa13.6□□□□□ -0.23
PRPF40B-209ENST00000548825 ST13P5Q8NFI4 369 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms