RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ERP27Q96DN0 273 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 VCPIP1Q96JH7 1222 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 OR2A14Q96R47 310 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 GFM1Q96RP9 751 aaKnown RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 TMEM47Q9BQJ4 181 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 C1QTNF7Q9BXJ2 289 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 FTOQ9C0B1 505 aaKnown RBP eCLIP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 KCNN2Q9H2S1 579 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 PLAC1Q9HBJ0 212 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 LTB4R2Q9NPC1 389 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 SRPRBQ9Y5M8 271 aaKnown RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 SNX8Q9Y5X2 465 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 SESN1Q9Y6P5 492 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 KDM5AP29375 1690 aaKnown RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 BLMP54132 1417 aaPredicted RBP4.18□□□□□ -1.74
PTCH1-216ENST00000548379 RPGRIP1LQ68CZ1 1315 aa4.18□□□□□ -1.74
PTCH1-216ENST00000548379 WDR91A4D1P6 747 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 SOCS2O14508 198 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 HNRNPCL1O60812 293 aaKnown RBP4.17□□□□□ -1.74
PTCH1-216ENST00000548379 DAB1O75553 588 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 SLC25A12O75746 678 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 MTA2O94776 668 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CBSLP0DN79 551 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 NR2F1P10589 423 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 IL7RP16871 459 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CD58P19256 250 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CBSP35520 551 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 ABCG1P45844 678 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CLCN3P51790 818 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 RAD23BP54727 409 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 ZBED6P86452 979 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 ITGADQ13349 1161 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CTTNQ14247 550 aaKnown RBP4.17□□□□□ -1.74
PTCH1-216ENST00000548379 ETFDHQ16134 617 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CCDC142Q17RM4 750 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 KIAA0930Q6ICG6 404 aaPredicted RBP4.17□□□□□ -1.74
PTCH1-216ENST00000548379 DPY19L2P1Q6NXN4 242 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 LSMEM1Q8N8F7 131 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 SCCPDHQ8NBX0 429 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 NEXN-AS1Q8NBZ9 246 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 AGBL3Q8NEM8 1001 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CCDC34Q96HJ3 373 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 FEM1CQ96JP0 617 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 APOLD1Q96LR9 279 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 IFIH1Q9BYX4 1025 aaKnown RBP4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CATSPERBQ9H7T0 1116 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 TMEM51Q9NW97 253 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 NKIRAS2Q9NYR9 191 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CISD1Q9NZ45 108 aaKnown RBP4.17□□□□□ -1.74
PTCH1-216ENST00000548379 FBXL17Q9UF56 701 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 POLG2Q9UHN1 485 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 PCDHGB4Q9UN71 923 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 RPS6KL1Q9Y6S9 549 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 HFM1A2PYH4 1435 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 ATRNO75882 1429 aa4.17□□□□□ -1.74
PTCH1-216ENST00000548379 CEP152O94986 1710 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 A0A1W2PQ09 198 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 BECN2A8MW95 431 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 H0YGN5 161 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 J3KR12 359 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 SPRY3O43610 288 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 TOMM40O96008 361 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 RB1P06400 928 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 ADRB2P07550 413 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 IL11P20809 199 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 MAOAP21397 527 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 ACADLP28330 430 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 RFX2P48378 723 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 SORDQ00796 357 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 GPR18Q14330 331 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 BECN1Q14457 450 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 HNF4GQ14541 408 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 LEXMQ3ZCV2 418 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 PQLC2Q6ZP29 291 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 CLEC17AQ6ZS10 378 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 DPPA4Q7L190 304 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 DEFB132Q7Z7B7 95 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 HACE1Q8IYU2 909 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 OR8H2Q8N162 312 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 TMEM199Q8N511 208 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 AADATQ8N5Z0 425 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 HJURPQ8NCD3 748 aaPredicted RBP4.16□□□□□ -1.74
PTCH1-216ENST00000548379 TRIB2Q92519 343 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 RRNAD1Q96FB5 475 aaKnown RBP4.16□□□□□ -1.74
PTCH1-216ENST00000548379 CALML4Q96GE6 196 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 NLRP4Q96MN2 994 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 ZNF570Q96NI8 536 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 ACOX2Q99424 681 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 SMARCAD1Q9H4L7 1026 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 SETD4Q9NVD3 440 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 WSB2Q9NYS7 404 aaPredicted RBP4.16□□□□□ -1.74
PTCH1-216ENST00000548379 STK26Q9P289 416 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 IL36RNQ9UBH0 155 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 ERVK-11Q9UQG0 969 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 MAU2Q9Y6X3 613 aa4.16□□□□□ -1.74
PTCH1-216ENST00000548379 IGHV4-28A0A0C4DH34 117 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 RGS14O43566 566 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 JRKO75564 520 aa4.15□□□□□ -1.75
PTCH1-216ENST00000548379 ERAL1O75616 437 aaKnown RBP4.15□□□□□ -1.75
PTCH1-216ENST00000548379 CYC1P08574 325 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms