RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 STIP1P31948 543 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 CXCR5P32302 372 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 HMGCLP35914 325 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 DCDC1P59894 354 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 SNX1Q13596 522 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 GSE1Q14687 1217 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 SIX1Q15475 284 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 PARP6Q2NL67 630 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 ALS2CLQ60I27 953 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 DOK6Q6PKX4 331 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 KLHDC8BQ8IXV7 354 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 SDR16C5Q8N3Y7 309 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 TTC30BQ8N4P2 665 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 BLOC1S5Q8TDH9 187 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 PTCD2Q8WV60 388 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 RTP4Q96DX8 246 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 COX14Q96I36 57 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 PPP1R2P1Q96PQ5 205 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 APOL2Q9BQE5 337 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 TMEM168Q9H0V1 697 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 CDH19Q9H159 772 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 CARS2Q9HA77 564 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 RAD18Q9NS91 495 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 TRMT1Q9NXH9 659 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 HACD3Q9P035 362 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 DOLKQ9UPQ8 538 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 TMEM98Q9Y2Y6 226 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 JRKLQ9Y4A0 524 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 U3KQA8 63 aa18.62■□□□□ 0.57
PRPF40B-206ENST00000547764 CEP104O60308 925 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 BPIP17213 487 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 SPARCL1Q14515 664 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 C6orf132Q5T0Z8 1188 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 LVRNQ6Q4G3 990 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 DHRS13Q6UX07 377 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 GKN2Q86XP6 184 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 BOCQ9BWV1 1114 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 SPATA16Q9BXB7 569 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 SUDS3Q9H7L9 328 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 BPIFA1Q9NP55 256 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 NFKBIL1Q9UBC1 381 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 KLK13Q9UKR3 277 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 SUFUQ9UMX1 484 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 ZNF148Q9UQR1 794 aa18.61■□□□□ 0.57
PRPF40B-206ENST00000547764 USP12O75317 370 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 IVLP07476 585 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 GNPDA1P46926 289 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 ILKQ13418 452 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 CCNG2Q16589 344 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 P3H1Q32P28 736 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 ZNF569Q5MCW4 686 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 KCTD11Q693B1 232 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 GLT6D1Q7Z4J2 308 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 TRAM1L1Q8N609 369 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 CCL4L1Q8NHW4 92 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 SCG3Q8WXD2 468 aaKnown RBP18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 SCARF2Q96GP6 870 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 TBL1YQ9BQ87 522 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 IL17CQ9P0M4 197 aa18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 OAS3Q9Y6K5 1087 aaKnown RBP18.6■□□□□ 0.57
PRPF40B-206ENST00000547764 IFNB1P01574 187 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 ATP1A1P05023 1023 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 CDK4P11802 303 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 DUSP3P51452 185 aaPredicted RBP18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 LONRF2Q1L5Z9 754 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 DENND5AQ6IQ26 1287 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 TAF8Q7Z7C8 310 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 SLC35F3Q8IY50 421 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 SLC35F6Q8N357 371 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 TAB3Q8N5C8 712 aaPredicted RBP18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 MAIP1Q8WWC4 291 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 PLEKHG4BQ96PX9 1271 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 ZSCAN5AQ9BUG6 496 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 TRNAU1APQ9NX07 287 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 NCKIPSDQ9NZQ3 722 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 GPR34Q9UPC5 381 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 ZKSCAN5Q9Y2L8 839 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 NEUROG3Q9Y4Z2 214 aa18.59■□□□□ 0.57
PRPF40B-206ENST00000547764 FAM221BA6H8Z2 402 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 BUD23O43709 281 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 ASMTLO95671 621 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 MSLNQ13421 630 aaPredicted RBP18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 NR0B2Q15466 257 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 SMAD1Q15797 465 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 PDPK2PQ6A1A2 396 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 DRICH1Q6PGQ1 229 aaPredicted RBP18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 TMPRSS7Q7RTY8 843 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 PRUNE1Q86TP1 453 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 PDCD7Q8N8D1 485 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 GPBAR1Q8TDU6 330 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 GLMNQ92990 594 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 LRRC45Q96CN5 670 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 ARNT2Q9HBZ2 717 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 IL26Q9NPH9 171 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 EVA1BQ9NVM1 165 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 SIRPGQ9P1W8 387 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 VPS18Q9P253 973 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 ARL5AQ9Y689 179 aa18.58■□□□□ 0.56
PRPF40B-206ENST00000547764 SCN8AQ9UQD0 1980 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms