RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 LNP1A1A4G5 178 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 MROH6A6NGR9 719 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 GOLGA8MH3BSY2 632 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 K7ESM1 405 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 YKT6O15498 198 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 RAD51CO43502 376 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 MYCLP1P12525 358 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 IVDP26440 423 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 BLKP51451 505 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 TMPRSS15P98073 1019 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 SUZ12Q15022 739 aaKnown RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 KCTD19Q17RG1 926 aaPredicted RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 ANKRD22Q5VYY1 191 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 C8orf74Q6P047 294 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 HEATR4Q86WZ0 1026 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 SPATS2Q86XZ4 545 aaKnown RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 PTCD2Q8WV60 388 aaKnown RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 BTN2A2Q8WVV5 523 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 FUBP1Q96AE4 644 aaKnown RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 WDR92Q96MX6 357 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 GAREM1Q9H706 876 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 TMEM9BQ9NQ34 198 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 GPR27Q9NS67 375 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 SAMD15Q9P1V8 674 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 FNDC3AQ9Y2H6 1198 aaKnown RBP13.69□□□□□ -0.22
PTCH1-213ENST00000546820 KCTD3Q9Y597 815 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 SLC30A1Q9Y6M5 507 aa13.69□□□□□ -0.22
PTCH1-213ENST00000546820 ZFHX2Q9C0A1 2572 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 H3BM21 787 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 TNFRSF10CO14798 259 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 SEC31AO94979 1220 aaKnown RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 SLC25A14O95258 325 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 TNFP01375 233 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 MGAT1P26572 445 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 RXRGP48443 463 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 ZNF140P52738 457 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 HNRNPKP61978 463 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 ARHGAP8P85298 464 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 CDK3Q00526 305 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 BNC1Q01954 994 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 CAV1Q03135 178 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 PPARDQ03181 441 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 FZD2Q14332 565 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 ZNF423Q2M1K9 1284 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 DNAJC21Q5F1R6 531 aaKnown RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 TSTD2Q5T7W7 516 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 CASC4Q6P4E1 433 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 FAM151BQ6UXP7 276 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 ALYREFQ86V81 257 aaKnown RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 CAND1Q86VP6 1230 aaKnown RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 PARGQ86W56 976 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 MINDY1Q8N5J2 469 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 OR56A4Q8NGH8 313 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 ZNF398Q8TD17 642 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 CDKN2AIPNLQ96HQ2 116 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 SERPINB12Q96P63 405 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 EDEM2Q9BV94 578 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 SLC13A1Q9BZW2 595 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 DNAJC28Q9NX36 388 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 WHRNQ9P202 907 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 KLQ9UEF7 1012 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 TCAF1Q9Y4C2 921 aa13.68□□□□□ -0.22
PTCH1-213ENST00000546820 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.68□□□□□ -0.22
PTCH1-213ENST00000546820 GPR179Q6PRD1 2367 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 H7C0S8 307 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 INPP4BO15327 924 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 AVILO75366 819 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 SRP72O76094 671 aaKnown RBP13.67□□□□□ -0.22
PTCH1-213ENST00000546820 TMEM63AO94886 807 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 RASGRP1O95267 797 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 ASMTLO95671 621 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 SOD1P00441 154 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 CSF2P04141 144 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 ZNF883P0CG24 379 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 ITGA8P53708 1063 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 DRG2P55039 364 aaKnown RBP13.67□□□□□ -0.22
PTCH1-213ENST00000546820 MRPS25P82663 173 aaKnown RBP13.67□□□□□ -0.22
PTCH1-213ENST00000546820 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 PTPRCAPQ14761 206 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 CHRNA6Q15825 494 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 DUPD1Q68J44 220 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 HIBCHQ6NVY1 386 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-213ENST00000546820 PHYKPLQ8IUZ5 450 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 KIAA2013Q8IYS2 634 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 PDIK1LQ8N165 341 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 SLC22A18ASQ8N1D0 253 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 PELI3Q8N2H9 469 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 GDAP1Q8TB36 358 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 GLYATL1Q969I3 302 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 DNAJC1Q96KC8 554 aaKnown RBP13.67□□□□□ -0.22
PTCH1-213ENST00000546820 TTC25Q96NG3 672 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 VPS35Q96QK1 796 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 TTC1Q99614 292 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms