RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 DGCR6Q14129 220 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 TRIP4Q15650 581 aaPredicted RBP15.62■□□□□ 0.09
CUX1-211ENST00000546411 ZNF697Q5TEC3 545 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 TRAPPC5Q8IUR0 188 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 GPR156Q8NFN8 814 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 TNIP2Q8NFZ5 429 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 STYXQ8WUJ0 223 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 PTCD2Q8WV60 388 aaKnown RBP15.62■□□□□ 0.09
CUX1-211ENST00000546411 PTCD3Q96EY7 689 aaKnown RBP15.62■□□□□ 0.09
CUX1-211ENST00000546411 SUSD3Q96L08 255 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 NR1H4Q96RI1 486 aaPredicted RBP15.62■□□□□ 0.09
CUX1-211ENST00000546411 SH3GL1Q99961 368 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ZFYVE1Q9HBF4 777 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 TBC1D23Q9NUY8 699 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 PGAP2Q9UHJ9 254 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 TNPO3Q9Y5L0 923 aaKnown RBP15.62■□□□□ 0.09
CUX1-211ENST00000546411 SNAP91O60641 907 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 UGT2B4P06133 528 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ACSM2AQ08AH3 577 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ACSM2BQ68CK6 577 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ELMSAN1Q6PJG2 1045 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ADAMTSL2Q86TH1 951 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 SYT12Q8IV01 421 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ELMO1Q92556 727 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 MAGED4Q96JG8 741 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 PAIP1Q9H074 479 aaKnown RBP15.62■□□□□ 0.09
CUX1-211ENST00000546411 CCDC189A1A4V9 331 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 DCLK1O15075 740 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 SELPP16109 830 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 RPL5P46777 297 aaKnown RBP15.62■□□□□ 0.09
CUX1-211ENST00000546411 LDLRAD1Q5T700 205 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 REP15Q6BDI9 236 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 FBXO22Q8NEZ5 403 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 BRSK1Q8TDC3 778 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 TUBGCP5Q96RT8 1024 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 RIBC2Q9H4K1 309 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ATP13A3Q9H7F0 1226 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 TMLHEQ9NVH6 421 aa15.62■□□□□ 0.09
CUX1-211ENST00000546411 ABLIM1O14639 778 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 INSIG1O15503 277 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 IDO1P14902 403 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 ITPKAP23677 461 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 DEFB115Q30KQ5 88 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 PABPC1LQ4VXU2 614 aaKnown RBP15.61■□□□□ 0.09
CUX1-211ENST00000546411 IFNLR1Q8IU57 520 aaPredicted RBP15.61■□□□□ 0.09
CUX1-211ENST00000546411 APLFQ8IW19 511 aaPredicted RBP15.61■□□□□ 0.09
CUX1-211ENST00000546411 UTP15Q8TED0 518 aaKnown RBP15.61■□□□□ 0.09
CUX1-211ENST00000546411 CCDC28BQ9BUN5 200 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 CFAP97Q9P2B7 532 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 TDRKHQ9Y2W6 561 aaKnown RBP15.61■□□□□ 0.09
CUX1-211ENST00000546411 PRAMEF1O95521 474 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 UGT1A6P19224 532 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 UGT1A1P22309 533 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 UGT1A4P22310 534 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 UGT1A3P35503 534 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 UGT1A5P35504 534 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 RAD23AP54725 363 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 TXNDC5Q8NBS9 432 aaKnown RBP15.61■□□□□ 0.09
CUX1-211ENST00000546411 TLR6Q9Y2C9 796 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 A0A0D9SEW6 157 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 ENPP3O14638 875 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 VPS4BO75351 444 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 PSMB9P28065 219 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 NDST2P52849 883 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 IL10RBQ08334 325 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 HIST2H2ACQ16777 129 aaPredicted RBP15.61■□□□□ 0.09
CUX1-211ENST00000546411 UPP1Q16831 310 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 HIST2H2AA3Q6FI13 130 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 USP45Q70EL2 814 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 CLDN19Q8N6F1 224 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 C3orf58Q8NDZ4 430 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 COPS8Q99627 209 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 TRIM8Q9BZR9 551 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 FAM192AQ9GZU8 254 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 ATG10Q9H0Y0 220 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 CAPN10Q9HC96 672 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 PCDH12Q9NPG4 1184 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 CD84Q9UIB8 345 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 LAMB1P07942 1786 aa15.61■□□□□ 0.09
CUX1-211ENST00000546411 A0A1W2PQ67 120 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 CAPN1P07384 714 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 HSMCR30P0CW71 290 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 AOC1P19801 751 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 ETV4P43268 484 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 HCAR3P49019 387 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 RAP1GDS1P52306 607 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 CREB5Q02930 508 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 NOGQ13253 232 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 PPP1R3AQ16821 1122 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 IL23RQ5VWK5 629 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 LRRTM3Q86VH5 581 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 CNTD1Q8N815 330 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 KCNA7Q96RP8 456 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 ACAT2Q9BWD1 397 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 IPPKQ9H8X2 491 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 POLR1BQ9H9Y6 1135 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 TLL2Q9Y6L7 1015 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 SNUPNO95149 360 aaKnown RBP15.6■□□□□ 0.09
CUX1-211ENST00000546411 GJA1P17302 382 aa15.6■□□□□ 0.09
CUX1-211ENST00000546411 EFNA1P20827 205 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms