RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SEPT6Q14141 434 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 PPP1R7Q15435 360 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 ALG11Q2TAA5 492 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 HENMT1Q5T8I9 393 aaKnown RBP16.73■□□□□ 0.27
LTBR-215ENST00000546296 DOK6Q6PKX4 331 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 NYAP1Q6ZVC0 841 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 KLHL7Q8IXQ5 586 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 PHACTR4Q8IZ21 702 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 TRAM1L1Q8N609 369 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 DEFB124Q8NES8 71 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 LMX1AQ8TE12 382 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 PLEKHG4BQ96PX9 1271 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 ZSCAN5AQ9BUG6 496 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
LTBR-215ENST00000546296 IL17CQ9P0M4 197 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 SPASTQ9UBP0 616 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 APOBEC3BQ9UH17 382 aaKnown RBP16.73■□□□□ 0.27
LTBR-215ENST00000546296 KLF15Q9UIH9 416 aa16.73■□□□□ 0.27
LTBR-215ENST00000546296 NEMP2A6NFY4 417 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 TNFRSF10CO14798 259 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 TM4SF5O14894 197 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 ASMTLO95671 621 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 SOD1P00441 154 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 SPAM1P38567 509 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 HK3P52790 923 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 PTPRCAPQ14761 206 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 POU6F1Q14863 301 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 PRRT3Q5FWE3 981 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 PIP4P1Q86T03 277 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 TRIM74Q86UV6 250 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 RBFAQ8N0V3 343 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 EID2Q8N6I1 236 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 OR4K2Q8NGD2 314 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 OR1E3Q8WZA6 343 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 ZNF592Q92610 1267 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 CAMK1GQ96NX5 476 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 TCEAL2Q9H3H9 227 aaPredicted RBP16.72■□□□□ 0.27
LTBR-215ENST00000546296 SUDS3Q9H7L9 328 aaPredicted RBP16.72■□□□□ 0.27
LTBR-215ENST00000546296 CAAP1Q9H8G2 361 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 CYP4F12Q9HCS2 524 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 IL26Q9NPH9 171 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 EIF2B3Q9NR50 452 aaKnown RBP16.72■□□□□ 0.27
LTBR-215ENST00000546296 UCKL1Q9NWZ5 548 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.72■□□□□ 0.27
LTBR-215ENST00000546296 NFKBIL1Q9UBC1 381 aaPredicted RBP16.72■□□□□ 0.27
LTBR-215ENST00000546296 TMEM98Q9Y2Y6 226 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 KCTD3Q9Y597 815 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 LRRK1Q38SD2 2015 aa16.72■□□□□ 0.27
LTBR-215ENST00000546296 KNL1Q8NG31 2342 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 GLYATL1P3A0A0U1RQE8 302 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 FADS2P1A8MWK0 482 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 SCAMP1O15126 338 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 FFAR2O15552 330 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 CSRP1P21291 193 aaKnown RBP16.71■□□□□ 0.27
LTBR-215ENST00000546296 GRIA1P42261 906 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 POLD2P49005 469 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 TMPRSS15P98073 1019 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 MSLNQ13421 630 aaPredicted RBP16.71■□□□□ 0.27
LTBR-215ENST00000546296 C1orf61Q13536 156 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 CERCAMQ5T4B2 595 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 PDPK2PQ6A1A2 396 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 FAM151BQ6UXP7 276 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 DBX2Q6ZNG2 339 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 SLC25A45Q8N413 288 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 ZNF548Q8NEK5 533 aaPredicted RBP16.71■□□□□ 0.27
LTBR-215ENST00000546296 RUNDC3BQ96NL0 473 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 FGF22Q9HCT0 170 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 MRPL40Q9NQ50 206 aaKnown RBP16.71■□□□□ 0.27
LTBR-215ENST00000546296 PNMA8BQ9ULN7 279 aaPredicted RBP16.71■□□□□ 0.27
LTBR-215ENST00000546296 BTBD3Q9Y2F9 522 aa16.71■□□□□ 0.27
LTBR-215ENST00000546296 CEP250Q9BV73 2442 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 PRSS38A1L453 326 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 CCDC188H7C350 402 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 AP3B1O00203 1094 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 AQP9O43315 295 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 SLC25A14O95258 325 aaPredicted RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 CEACAM5P06731 702 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 ALPPL2P10696 532 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 ADCY8P40145 1251 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 NOVA1P51513 510 aaKnown RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 SARNPP82979 210 aaKnown RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 CDK16Q00536 496 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 LAMB3Q13751 1172 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 TCEA2Q15560 299 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 CHRNA6Q15825 494 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 MARK2Q7KZI7 788 aaKnown RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 GDAP1Q8TB36 358 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 PDXPQ96GD0 296 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 COX14Q96I36 57 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 CDC6Q99741 560 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 FRMD8Q9BZ67 464 aaPredicted RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 CARS2Q9HA77 564 aaKnown RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 CASS4Q9NQ75 786 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 PCYOX1Q9UHG3 505 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 PCOLCE2Q9UKZ9 415 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 CNOT6Q9ULM6 557 aaKnown RBP16.7■□□□□ 0.26
LTBR-215ENST00000546296 DOLKQ9UPQ8 538 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 DGKBQ9Y6T7 804 aa16.7■□□□□ 0.26
LTBR-215ENST00000546296 LDB2O43679 373 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms