RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 NCBP2-AS2Q69YL0 99 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 DOK6Q6PKX4 331 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ATG14Q6ZNE5 492 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 USP45Q70EL2 814 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ZNF761Q86XN6 746 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ATPAF2Q8N5M1 289 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ANKRD20A12PQ8NF67 263 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ARRDC2Q8TBH0 407 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 FATE1Q969F0 183 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 LYSMD1Q96S90 227 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 TDRD1Q9BXT4 1180 aaKnown RBP12.48□□□□□ -0.41
COPS7A-221ENST00000546229 FAM117AQ9C073 453 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 SLC25A18Q9H1K4 315 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ADNPQ9H2P0 1102 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 SIDT1Q9NXL6 827 aaKnown RBP12.48□□□□□ -0.41
COPS7A-221ENST00000546229 ADGRG1Q9Y653 693 aa12.48□□□□□ -0.41
COPS7A-221ENST00000546229 A0A1B0GTH6 734 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 FADS2P1A8MWK0 482 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 DUX1O43812 170 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 RAD1O60671 282 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 DLGAP3O95886 979 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 MYBL1P10243 752 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 ZNF30P17039 623 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 POLE2P56282 527 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 TYRO3Q06418 890 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 LRP8Q14114 963 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 BOLA3Q53S33 107 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 HENMT1Q5T8I9 393 aaKnown RBP12.47□□□□□ -0.41
COPS7A-221ENST00000546229 MARC1Q5VT66 337 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 ANKS6Q68DC2 871 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 TIPARPQ7Z3E1 657 aaKnown RBP12.47□□□□□ -0.41
COPS7A-221ENST00000546229 HSPH1Q92598 858 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 AP2M1Q96CW1 435 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 EID2BQ96D98 161 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 RTP4Q96DX8 246 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 BTBD6Q96KE9 485 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 NAP1L5Q96NT1 182 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-221ENST00000546229 DPYSL5Q9BPU6 564 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 BPIFA3Q9BQP9 254 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 NT5MQ9NPB1 228 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 VPS18Q9P253 973 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 RCOR3Q9P2K3 495 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-221ENST00000546229 TBC1D29Q9UFV1 150 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 TUBD1Q9UJT1 453 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 PCDHB11Q9Y5F2 797 aa12.47□□□□□ -0.41
COPS7A-221ENST00000546229 MN1Q10571 1320 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 MAP3K6O95382 1288 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 MMP2P08253 660 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 SFTPCP11686 197 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 SKILP12757 684 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 SERPINB6P35237 376 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 PBX1P40424 430 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 ARL4AP40617 200 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 GARSP41250 739 aaKnown RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 GPR1P46091 355 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 DSC2Q02487 901 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 TLE1Q04724 770 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 NIPAL4Q0D2K0 466 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 KCNAB2Q13303 367 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 DPYSL3Q14195 570 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 PAFAH1B3Q15102 231 aaKnown RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 BORAQ6PGQ7 559 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 SASS6Q6UVJ0 657 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 RAVER1Q8IY67 606 aaKnown RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 FAF2Q96CS3 445 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 TRIM11Q96F44 468 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 SLC45A3Q96JT2 553 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 ARHGAP9Q9BRR9 750 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 RIOK2Q9BVS4 552 aaKnown RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 THAP2Q9H0W7 228 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 EPN3Q9H201 632 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 APMAPQ9HDC9 416 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 SARS2Q9NP81 518 aaKnown RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 KCNK4Q9NYG8 393 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 OGFRQ9NZT2 677 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 TMEM63CQ9P1W3 806 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.41
COPS7A-221ENST00000546229 TMEM184BQ9Y519 407 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 HEMK1Q9Y5R4 338 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-221ENST00000546229 LOC101059948A0A1B0GTJ6 334 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 EFCAB7A8K855 629 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 CYP1A2P05177 515 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 HLA-DQB2P05538 268 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 ATP1A2P50993 1020 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 RAB15P59190 212 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 UBE2IP63279 158 aaKnown RBP12.45□□□□□ -0.42
COPS7A-221ENST00000546229 MC2RQ01718 297 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 KLHL30Q0D2K2 578 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 FIGNQ5HY92 759 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 COLEC12Q5KU26 742 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 MARK2Q7KZI7 788 aaKnown RBP12.45□□□□□ -0.42
COPS7A-221ENST00000546229 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 NRSN1Q8IZ57 195 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms