RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 UNQ6494/PRO21346Q6UXR6 183 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 RD3Q7Z3Z2 195 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 KDELC2Q7Z4H8 507 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 SLC35F3Q8IY50 421 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 TRIM58Q8NG06 486 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 SCG3Q8WXD2 468 aaKnown RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 GLMNQ92990 594 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 HIC2Q96JB3 615 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 FAM118BQ9BPY3 351 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 FRMD8P1Q9BZ68 369 aaPredicted RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 GPR63Q9BZJ6 419 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 CYP4F12Q9HCS2 524 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 MRPL40Q9NQ50 206 aaKnown RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 TRNAU1APQ9NX07 287 aaKnown RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 HACD3Q9P035 362 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 CNOT6Q9ULM6 557 aaKnown RBP11.81□□□□□ -0.52
YBX3-217ENST00000546164 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 PPP2R2CQ9Y2T4 447 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 SPO11Q9Y5K1 396 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 LRP4O75096 1905 aa11.81□□□□□ -0.52
YBX3-217ENST00000546164 TCRBV7S2A1N4TA0A589 114 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 GOLGA6CA6NDK9 693 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 GOLGA6BA6NDN3 693 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 FADS2P1A8MWK0 482 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 FUCA1P04066 466 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 FGF1P05230 155 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 PIRTP0C851 137 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 GOLGA6DP0CG33 693 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 ADRA1AP35348 466 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 HMGCLP35914 325 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 TNNT3P45378 269 aaPredicted RBP11.8□□□□□ -0.52
YBX3-217ENST00000546164 NR0B2Q15466 257 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 SLC1A5Q15758 541 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 SIRPB2Q5JXA9 342 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 SEL1L2Q5TEA6 688 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 OGFOD3Q6PK18 319 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 RANBP10Q6VN20 620 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 SLC13A5Q86YT5 568 aaPredicted RBP11.8□□□□□ -0.52
YBX3-217ENST00000546164 TTC30BQ8N4P2 665 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 TRAM1L1Q8N609 369 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 ARL10Q8N8L6 244 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 IPMKQ8NFU5 416 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 CCDC110Q8TBZ0 833 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 DTX3LQ8TDB6 740 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 GPBAR1Q8TDU6 330 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 NAT6Q93015 286 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 RTP4Q96DX8 246 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 ZSCAN5AQ9BUG6 496 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 TMEM168Q9H0V1 697 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 CARS2Q9HA77 564 aaKnown RBP11.8□□□□□ -0.52
YBX3-217ENST00000546164 LZTFL1Q9NQ48 299 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 GOLGA6AQ9NYA3 693 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 VPS18Q9P253 973 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 SUFUQ9UMX1 484 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 DOLKQ9UPQ8 538 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 R3HDM2Q9Y2K5 976 aaKnown RBP11.8□□□□□ -0.52
YBX3-217ENST00000546164 AAR2Q9Y312 384 aaKnown RBP11.8□□□□□ -0.52
YBX3-217ENST00000546164 ASXL3Q9C0F0 2248 aa11.8□□□□□ -0.52
YBX3-217ENST00000546164 DMXL2Q8TDJ6 3036 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 APC2O95996 2303 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 TMEM8BA6NDV4 472 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 C1QTNF9BB2RNN3 333 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 AURKAO14965 403 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 PROS1P07225 676 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 C1QTNF9P0C862 333 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 MYF5P13349 255 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 BPIP17213 487 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 PSMB4P28070 264 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 CHRNA4P43681 627 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 INSM1Q01101 510 aaPredicted RBP11.79□□□□□ -0.52
YBX3-217ENST00000546164 ILF3Q12906 894 aaKnown RBP eCLIP11.79□□□□□ -0.52
YBX3-217ENST00000546164 CAMK2BQ13554 666 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 PRPSAP1Q14558 356 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 HES3Q5TGS1 186 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 ZDHHC20Q5W0Z9 365 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 GUSBP11Q6P575 273 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 TAF8Q7Z7C8 310 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 NRROSQ86YC3 692 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 DCBLD1Q8N8Z6 715 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 FAM71DQ8N9W8 422 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 KDF1Q8NAX2 398 aaPredicted RBP11.79□□□□□ -0.52
YBX3-217ENST00000546164 GPR26Q8NDV2 337 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 GPR156Q8NFN8 814 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 IFI44Q8TCB0 444 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 PTCD2Q8WV60 388 aaKnown RBP11.79□□□□□ -0.52
YBX3-217ENST00000546164 PLEKHG4BQ96PX9 1271 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 FSD1LQ9BXM9 530 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 GSDMCQ9BYG8 508 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 MOSPD1Q9UJG1 213 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 GPR34Q9UPC5 381 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 WDFY3Q8IZQ1 3526 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 ANKRD11Q6UB99 2663 aaPredicted RBP11.79□□□□□ -0.52
YBX3-217ENST00000546164 ZZEF1O43149 2961 aa11.79□□□□□ -0.52
YBX3-217ENST00000546164 PTPRBP23467 1997 aa11.78□□□□□ -0.52
YBX3-217ENST00000546164 GPR89AB7ZAQ6 455 aa11.78□□□□□ -0.52
YBX3-217ENST00000546164 F5H423 210 aaPredicted RBP11.78□□□□□ -0.52
YBX3-217ENST00000546164 INPP4BO15327 924 aa11.78□□□□□ -0.52
YBX3-217ENST00000546164 OPA1O60313 960 aa11.78□□□□□ -0.52
YBX3-217ENST00000546164 DNAJC6O75061 913 aa11.78□□□□□ -0.52
YBX3-217ENST00000546164 PPFIA2O75334 1257 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms