RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TCAF2A6NFQ2 919 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 SIGLEC16A6NMB1 481 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PAGE1O75459 146 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 POP4O95707 220 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PCCBP05166 539 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CCDC159P0C7I6 412 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 JMJD7P0C870 316 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 GSTT2P0CG29 244 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 GSTT2BP0CG30 244 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CPA3P15088 417 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 NUDT2P50583 147 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CHRNB3Q05901 458 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 TMC3Q7Z5M5 1100 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 KRT73Q86Y46 540 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 MREGQ8N565 214 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 WFIKKN2Q8TEU8 576 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CLEC4CQ8WTT0 213 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PIGKQ92643 395 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 MYO19Q96H55 970 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 ACBD6Q9BR61 282 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 DZANK1Q9NVP4 752 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 WBP1LQ9NX94 342 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CLUHO75153 1309 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 KNTC1P50748 2209 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 C16orf96A6NNT2 1141 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PEX12O00623 359 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 OR6B1O95007 311 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CYP1A2P05177 515 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 TFPIP10646 304 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 KCNE1P15382 129 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PRLRP16471 622 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 EN2P19622 333 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CNTFP26441 200 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 RBL1P28749 1068 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 ACTR1BP42025 376 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CDK7P50613 346 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 TAS2R40P59535 323 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 ACTR1AP61163 376 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 ZC3H14Q6PJT7 736 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 MTDHQ86UE4 582 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 NKAPQ8N5F7 415 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 FNDC5Q8NAU1 212 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 LCN9Q8WX39 176 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 ROPN1BQ9BZX4 212 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 NRDE2Q9H7Z3 1164 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 ROPN1Q9HAT0 212 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PCDH9Q9HC56 1237 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 KCTD5Q9NXV2 234 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 KLQ9UEF7 1012 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 COQ6Q9Y2Z9 468 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PRKAB1Q9Y478 270 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 FAM220BPB1ANY3 271 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CLDN4O14493 209 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 TSPAN9O75954 239 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PSMG1O95456 288 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CRABP2P29373 138 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 IGFALSP35858 605 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 INHBCP55103 352 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PARP6Q2NL67 630 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 TRIM16LQ309B1 348 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 STXBP5Q5T5C0 1151 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 SEL1L3Q68CR1 1132 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 GRASPQ7Z6J2 395 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 FAM129CQ86XR2 697 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 SLC22A17Q8WUG5 538 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 ALG3Q92685 438 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 EME1Q96AY2 570 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CNBD2Q96M20 576 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 KLHL5Q96PQ7 755 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 S100A13Q99584 98 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 NEK6Q9HC98 313 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 HCSTQ9UBK5 93 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 GPC6Q9Y625 555 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 KIAA1217Q5T5P2 1943 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CCNDBP1O95273 360 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 CST5P28325 142 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PTPN4P29074 926 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 HOXC12P31275 282 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 HPCAL1P37235 193 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 SLC11A1P49279 550 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PLK1P53350 603 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 OVGP1Q12889 678 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 LYPLAL1Q5VWZ2 237 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 OR52E8Q6IFG1 317 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 BHLHB9Q6PI77 547 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 FAM151BQ6UXP7 276 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 RNF44Q7L0R7 432 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 RAVER1Q8IY67 606 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 C2orf15Q8WU43 125 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 DGCR14Q96DF8 476 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 DEPDC7Q96QD5 511 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 SNRNP25Q9BV90 132 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 PABPC3Q9H361 631 aaKnown RBP8.58□□□□□ -1.04
CLIP1-218ENST00000545889 FAM83DQ9H4H8 585 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 MID1IP1Q9NPA3 183 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 DNAJC11Q9NVH1 559 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 NAALADL1Q9UQQ1 740 aa8.58□□□□□ -1.04
CLIP1-218ENST00000545889 COL11A1P12107 1806 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms