RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KIF1BPQ96EK5 621 aa4.53□□□□□ -1.68
SNHG1-224ENST00000545688 MAELQ96JY0 434 aaKnown RBP4.53□□□□□ -1.68
SNHG1-224ENST00000545688 FAF1Q9UNN5 650 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-224ENST00000545688 DLGAP4Q9Y2H0 992 aa4.53□□□□□ -1.68
SNHG1-224ENST00000545688 WDR1O75083 606 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 GNAQP50148 359 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 RPP30P78346 268 aaKnown RBP4.52□□□□□ -1.69
SNHG1-224ENST00000545688 GALNT2Q10471 571 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 GTF2H2Q13888 395 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 C14orf177Q52M58 125 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 PDSS1Q5T2R2 415 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 GTF2H2CQ6P1K8 395 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 PQLC2Q6ZP29 291 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 HMGCLL1Q8TB92 370 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 PIGTQ969N2 578 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 RHBDF1Q96CC6 855 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 GCC1Q96CN9 775 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 KLHL29Q96CT2 875 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 ORAI1Q96D31 301 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 UBXN10Q96LJ8 280 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 POLR3CQ9BUI4 534 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-224ENST00000545688 C1QTNF5Q9BXJ0 243 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 IFIH1Q9BYX4 1025 aaKnown RBP4.52□□□□□ -1.69
SNHG1-224ENST00000545688 FKRPQ9H9S5 495 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 HCFC1R1Q9NWW0 138 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 CEPT1Q9Y6K0 416 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 SNED1Q8TER0 1413 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 ADAMTS12P58397 1594 aa4.52□□□□□ -1.69
SNHG1-224ENST00000545688 ADCY10Q96PN6 1610 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 SNAP23O00161 211 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 IFRD1O00458 451 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-224ENST00000545688 EGFP01133 1207 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 POLBP06746 335 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 VEGFCP49767 419 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 CSNK2A1P68400 391 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-224ENST00000545688 TLE2Q04725 743 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 FOXD4Q12950 439 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-224ENST00000545688 ZNF234Q14588 700 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 GPR68Q15743 365 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 COL28A1Q2UY09 1125 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 SIRPB2Q5JXA9 342 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 NAA35Q5VZE5 725 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 CSNK2A3Q8NEV1 391 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 CTCFLQ8NI51 663 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-224ENST00000545688 GRAMD2BQ96HH9 432 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 APOPT1Q96IL0 206 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 SEBOXQ9HB31 216 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-224ENST00000545688 PPP1R14DQ9NXH3 145 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 MPP6Q9NZW5 540 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 PADI3Q9ULW8 664 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 GLI2P10070 1586 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 PBRM1Q86U86 1689 aa4.51□□□□□ -1.69
SNHG1-224ENST00000545688 PTPRCP08575 1304 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 PMS2P5A8MQ11 134 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 VCYO14598 125 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 SEC31AO94979 1220 aaKnown RBP4.5□□□□□ -1.69
SNHG1-224ENST00000545688 HOXB5P09067 269 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 HSD3B1P14060 373 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 HOXA1P49639 335 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-224ENST00000545688 NR0B1P51843 470 aaKnown RBP4.5□□□□□ -1.69
SNHG1-224ENST00000545688 ERVK11-1P61568 191 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 FOXM1Q08050 763 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 FCN2Q15485 313 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 ALG11Q2TAA5 492 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 BRAT1Q6PJG6 821 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 CYP26C1Q6V0L0 522 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 SLC46A3Q7Z3Q1 461 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 BEST3Q8N1M1 668 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 KLHDC9Q8NEP7 349 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 OR5R1Q8NH85 324 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 FAM76AQ8TAV0 307 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 F2RL3Q96RI0 385 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 RBM4Q9BWF3 364 aaKnown RBP4.5□□□□□ -1.69
SNHG1-224ENST00000545688 GFRA4Q9GZZ7 299 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 KCND2Q9NZV8 630 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 TBX20Q9UMR3 447 aa4.5□□□□□ -1.69
SNHG1-224ENST00000545688 PPRC1Q5VV67 1664 aaKnown RBP4.5□□□□□ -1.69
SNHG1-224ENST00000545688 UTYO14607 1347 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 A0A1W2PQM1 296 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 TSPAN4O14817 238 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 ZNHIT1O43257 154 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 PAX1P15863 534 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 NR1D1P20393 614 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 CDAP32320 146 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 TAS2R38P59533 333 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 EEF1A1P68104 462 aaKnown RBP4.49□□□□□ -1.69
SNHG1-224ENST00000545688 FGFBP1Q14512 234 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 TMEM30BQ3MIR4 351 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 EEF1A1P5Q5VTE0 462 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 FRG2Q64ET8 278 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 ARHGAP11AQ6P4F7 1023 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 FAM171BQ6P995 826 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 RAD9BQ6WBX8 426 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 ACVR1CQ8NER5 493 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 CADM4Q8NFZ8 388 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 TAF15Q92804 592 aaKnown RBP eCLIP4.49□□□□□ -1.69
SNHG1-224ENST00000545688 ZNF524Q96C55 264 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 QRFPRQ96P65 431 aa4.49□□□□□ -1.69
SNHG1-224ENST00000545688 SLC6A13Q9NSD5 602 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms