RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PDE11AQ9HCR9 933 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 INTS13Q9NVM9 706 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 ELOVL2Q9NXB9 296 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 FBXL12Q9NXK8 326 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 SERGEFQ9UGK8 458 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 LIMA1Q9UHB6 759 aaKnown RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 AGAP1Q9UPQ3 857 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 SH3BP1Q9Y3L3 701 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 OAS3Q9Y6K5 1087 aaKnown RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 X6R8D5 127 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 ABCA4P78363 2273 aa6.82□□□□□ -1.32
LDHA-223ENST00000545215 TDRD6O60522 2096 aaKnown RBP6.82□□□□□ -1.32
LDHA-223ENST00000545215 LOC101059948A0A1B0GTJ6 334 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 A0A1W2PQM1 296 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 RAD1O60671 282 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 HUS1O60921 280 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 FAM163BP0C2L3 166 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 P4HA1P13674 534 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 ACAT1P24752 427 aaKnown RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 FPR2P25090 351 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 RPL10P27635 214 aaKnown RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 GPR3P46089 330 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 MXI1P50539 228 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 SCAND1P57086 179 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 CCL7P80098 99 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 RBP5P82980 135 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 MYL7Q01449 175 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 SLC20A2Q08357 652 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 CPSF6Q16630 551 aaKnown RBP eCLIP6.81□□□□□ -1.32
LDHA-223ENST00000545215 IFI16Q16666 785 aaKnown RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 ZACNQ401N2 412 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 DCAF17Q5H9S7 520 aaPredicted RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 TCERG1LQ5VWI1 586 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 TPGS1Q6ZTW0 290 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 LUZP1Q86V48 1076 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 FJX1Q86VR8 437 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 IRF2BP1Q8IU81 584 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 TMEM86AQ8N2M4 240 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 PDCL2Q8N4E4 241 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 TTC39CQ8N584 583 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 GANCQ8TET4 914 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 SLC35C1Q96A29 364 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 TP53INP1Q96A56 240 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 CCDC127Q96BQ5 260 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 IQCDQ96DY2 449 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 FAM84AQ96KN4 292 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 PPP1R13BQ96KQ4 1090 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 TAAR9Q96RI9 348 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 SPOCK3Q9BQ16 436 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 ACBD6Q9BR61 282 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 DNAI2Q9GZS0 605 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 PABPC3Q9H361 631 aaKnown RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 NDST4Q9H3R1 872 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 MS4A5Q9H3V2 200 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 EPB41L1Q9H4G0 881 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 ATP13A1Q9HD20 1204 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 MRPL40Q9NQ50 206 aaKnown RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 PRSS16Q9NQE7 514 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 SAMSN1Q9NSI8 373 aaKnown RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 CCM2LQ9NUG4 571 aaPredicted RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 MKS1Q9NXB0 559 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 DDX43Q9NXZ2 648 aaKnown RBP6.81□□□□□ -1.32
LDHA-223ENST00000545215 GULP1Q9UBP9 304 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 L1RE1Q9UN81 338 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 COQ4Q9Y3A0 265 aa6.81□□□□□ -1.32
LDHA-223ENST00000545215 LRRIQ3A6PVS8 624 aaPredicted RBP6.8□□□□□ -1.32
LDHA-223ENST00000545215 TPP1O14773 563 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 DPM1O60762 260 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 H2AFYO75367 372 aaKnown RBP6.8□□□□□ -1.32
LDHA-223ENST00000545215 SERPINC1P01008 464 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 LTFP02788 710 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 COL6A2P12110 1019 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 LPOP22079 712 aaPredicted RBP6.8□□□□□ -1.32
LDHA-223ENST00000545215 PCSK1P29120 753 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 NUDT1P36639 197 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 RABIFP47224 123 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 LHX1P48742 406 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 FMO5P49326 533 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 MFAP3P55082 362 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 HNRNPKP61978 463 aaKnown RBP eCLIP6.8□□□□□ -1.32
LDHA-223ENST00000545215 DMTNQ08495 405 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 BIRC3Q13489 604 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 TRPC3Q13507 836 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 GTF2H3Q13889 308 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 KRT31Q15323 416 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 SGSM1Q2NKQ1 1148 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 MINDY4Q4G0A6 757 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 VWA3BQ502W6 1294 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 DCAF10Q5QP82 559 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 ZNF776Q68DI1 518 aaPredicted RBP6.8□□□□□ -1.32
LDHA-223ENST00000545215 SARM1Q6SZW1 724 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 GBP6Q6ZN66 633 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 TRAPPC11Q7Z392 1133 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 PRPF39Q86UA1 669 aaKnown RBP6.8□□□□□ -1.32
LDHA-223ENST00000545215 SPATA2LQ8IUW3 424 aaPredicted RBP6.8□□□□□ -1.32
LDHA-223ENST00000545215 CEP97Q8IW35 865 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 PLD6Q8N2A8 252 aaKnown RBP6.8□□□□□ -1.32
LDHA-223ENST00000545215 FBXL13Q8NEE6 735 aa6.8□□□□□ -1.32
LDHA-223ENST00000545215 ZNF548Q8NEK5 533 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms