RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MN1Q10571 1320 aaPredicted RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 A6NCN8 305 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 INPP4BO15327 924 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 KRT86O43790 486 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 NDUFA10O95299 355 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 LSM8O95777 96 aaKnown RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 ANKRD34CP0C6C1 535 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 TEAD1P28347 426 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 VIPR1P32241 457 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 NOP2P46087 812 aaKnown RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 SCNN1BP51168 640 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 CCL11P51671 97 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 RPS18P62269 152 aaKnown RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 POLR2LP62875 67 aaKnown RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 PEX6Q13608 980 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 PAPD7Q5XG87 772 aaKnown RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 JMJD6Q6NYC1 403 aaPredicted RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 ARHGAP36Q6ZRI8 547 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 SLFN11Q7Z7L1 901 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 TSPAN33Q86UF1 283 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 CREBRFQ8IUR6 639 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 SLC20A1Q8WUM9 679 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 C19orf60Q96EN9 201 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 STAMBPL1Q96FJ0 436 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 ELMO2Q96JJ3 720 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 TIGD1Q96MW7 591 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 MFRPQ9BY79 579 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 SLC39A8Q9C0K1 460 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 ACTL8Q9H568 366 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 AKIRIN1Q9H9L7 192 aaPredicted RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 OGFRQ9NZT2 677 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 TBC1D29Q9UFV1 150 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 LNPEPQ9UIQ6 1025 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 PRKAB1Q9Y478 270 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 PCDHGC4Q9Y5F7 938 aa9.32□□□□□ -0.92
CHD4-212ENST00000545083 PCDHGA9Q9Y5G4 932 aaKnown RBP9.32□□□□□ -0.92
CHD4-212ENST00000545083 POLEQ07864 2286 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 GOLGA6L3A6NEY3 463 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 ARGFXA6NJG6 315 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 HTRA2O43464 458 aaPredicted RBP9.31□□□□□ -0.92
CHD4-212ENST00000545083 PALMO75781 387 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 TIAF1O95411 115 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 RECKO95980 971 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 C9P02748 559 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 MMP8P22894 467 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 CASP14P31944 242 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 RFC1P35251 1148 aaPredicted RBP9.31□□□□□ -0.92
CHD4-212ENST00000545083 GARSP41250 739 aaKnown RBP9.31□□□□□ -0.92
CHD4-212ENST00000545083 SEPHS1P49903 392 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 PAPOLAP51003 745 aaKnown RBP9.31□□□□□ -0.92
CHD4-212ENST00000545083 NDST2P52849 883 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 EPHA4P54764 986 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 NR6A1Q15406 480 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 IYDQ6PHW0 289 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 WDR59Q6PJI9 974 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 TECPR1Q7Z6L1 1165 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 GALNT13Q8IUC8 556 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 RASGRP3Q8IV61 690 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 MSANTD4Q8NCY6 345 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 SLC30A5Q8TAD4 765 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 C9orf72Q96LT7 481 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 SMIM14Q96QK8 99 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 OR6C1Q96RD1 312 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 AGAP2Q99490 1192 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 C11orf70Q9BRQ4 267 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 CINPQ9BW66 212 aaPredicted RBP9.31□□□□□ -0.92
CHD4-212ENST00000545083 SLC29A3Q9BZD2 475 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 ABCG8Q9H221 673 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 CATSPERBQ9H7T0 1116 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 LHX9Q9NQ69 397 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 MAP10Q9P2G4 905 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 CD84Q9UIB8 345 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 FHOD1Q9Y613 1164 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 CCDC168Q8NDH2 2452 aa9.31□□□□□ -0.92
CHD4-212ENST00000545083 NPIPB15A6NHN6 443 aaPredicted RBP9.3□□□□□ -0.92
CHD4-212ENST00000545083 CCP110O43303 1012 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 KIF1CO43896 1103 aaKnown RBP9.3□□□□□ -0.92
CHD4-212ENST00000545083 DNAJC6O75061 913 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 SPAG6O75602 509 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 CBX6O95503 412 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 CPP00450 1065 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 CYP1A1P04798 512 aaPredicted RBP9.3□□□□□ -0.92
CHD4-212ENST00000545083 NFKBIAP25963 317 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 GPR1P46091 355 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 LEPRP48357 1165 aaKnown RBP9.3□□□□□ -0.92
CHD4-212ENST00000545083 DPTQ07507 201 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 NSUN2Q08J23 767 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD4-212ENST00000545083 TRAF2Q12933 501 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 PTP4A2Q12974 167 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 IL10RAQ13651 578 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 LAMB3Q13751 1172 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 LRP8Q14114 963 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 UGT8Q16880 541 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 SLC6A19Q695T7 634 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 SCYL2Q6P3W7 929 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 FAM199XQ6PEV8 388 aaPredicted RBP9.3□□□□□ -0.92
CHD4-212ENST00000545083 ADAMTSL4Q6UY14 1074 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms