RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 VPS37AQ8NEZ2 397 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 DGCR14Q96DF8 476 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 FEM1CQ96JP0 617 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 GINS4Q9BRT9 223 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CEP44Q9C0F1 390 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SENP6Q9GZR1 1112 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 DYRK4Q9NR20 520 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 NUDT4Q9NZJ9 180 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SCML2Q9UQR0 700 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TBC1D30Q9Y2I9 924 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ATP6AP2A0A1C7CYW4 349 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SEPT4O43236 478 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ATP6AP2O75787 350 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 MSH3P20585 1137 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 IMPDH1P20839 514 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CCT8P50990 548 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 DNAJB13P59910 316 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 HERVK_113P63132 956 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TRAF2Q12933 501 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 FOXD4Q12950 439 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 USP41Q3LFD5 358 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 PKDCCQ504Y2 493 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SIRPB2Q5JXA9 342 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ARMC3Q5W041 872 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CHADLQ6NUI6 762 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 PLEKHM3Q6ZWE6 761 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 DEFB128Q7Z7B8 93 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 EID3Q8N140 333 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 DHRSXQ8N5I4 330 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 DNAJB14Q8TBM8 379 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 C2orf15Q8WU43 125 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 PLD4Q96BZ4 506 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 OTUB1Q96FW1 271 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 PPP3R2Q96LZ3 170 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SYT17Q9BSW7 474 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ERVK-6Q9BXR3 956 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ACTR8Q9H981 624 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SMPD4Q9NXE4 827 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 MYH9P35579 1960 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 A8MT66 165 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TAF4O00268 1085 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 IFRD1O00458 451 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 DLX3O60479 287 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 NBNO60934 754 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 OTCP00480 354 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CKMP06732 381 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 T-ENOLP0DO92 83 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 MZF1P28698 734 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 CCNHP51946 323 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 PITX1P78337 314 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 CLCQ05315 142 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TRIM25Q14258 630 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 CRY1Q16526 586 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TJAP1Q5JTD0 557 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 VARS2Q5ST30 1063 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 MARCH8Q5T0T0 291 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TRNP1Q6NT89 227 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ZNF549Q6P9A3 640 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 USP45Q70EL2 814 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 AMIGO2Q86SJ2 522 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 PHTF2Q8N3S3 785 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 RNF217Q8TC41 542 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 S100ZQ8WXG8 99 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 SH3KBP1Q96B97 665 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 MTFMTQ96DP5 389 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 MYO19Q96H55 970 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 FUBP3Q96I24 572 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS50-220ENST00000544910 EXOC2Q96KP1 924 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TBATAQ96M53 351 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 TLE6Q9H808 572 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ADAM30Q9UKF2 790 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 GNEQ9Y223 722 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 GMEB1Q9Y692 573 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 AK5Q9Y6K8 562 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 A0A088AWK7 358 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 C9IYK1 514 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CCL22O00626 93 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ACSL4O60488 711 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CPSF4O95639 269 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 FESP07332 822 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CYP2A6P11509 494 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 JAK1P23458 1154 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 HALP42357 657 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 FLT3LGP49771 235 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 POLR2JP52435 117 aaKnown RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 CDH13P55290 713 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 GJA9P57773 515 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 CACNG1Q06432 222 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 VAC14Q08AM6 782 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 FCHO2Q0JRZ9 810 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 HIST2H2ACQ16777 129 aaPredicted RBP5.77□□□□□ -1.49
VPS50-220ENST00000544910 ARMC4Q5T2S8 1044 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 FAM91A1Q658Y4 838 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 HIST2H2AA3Q6FI13 130 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 ADAMTSL2Q86TH1 951 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 BBS7Q8IWZ6 715 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 RAB42Q8N4Z0 105 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 BRSK1Q8TDC3 778 aa5.77□□□□□ -1.49
VPS50-220ENST00000544910 NAT14Q8WUY8 206 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms