RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 OR56A4Q8NGH8 313 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 BRSK1Q8TDC3 778 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 BLOC1S5Q8TDH9 187 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 BTN2A2Q8WVV5 523 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 MAGOHBQ96A72 148 aaKnown RBP19.02■□□□□ 0.64
DDX55-211ENST00000544429 PDXPQ96GD0 296 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 LRRC61Q9BV99 259 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 RAB6BQ9NRW1 208 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 SAR1BQ9Y6B6 198 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.01■□□□□ 0.63
DDX55-211ENST00000544429 H3BM21 787 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 GAPDHSO14556 408 aaPredicted RBP19.01■□□□□ 0.63
DDX55-211ENST00000544429 GIPC1O14908 333 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 SCAMP1O15126 338 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 PHF2O75151 1096 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 PPFIA2O75334 1257 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 PSMA3P25788 255 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 ACTN2P35609 894 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 BLKP51451 505 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 TRAM1L1Q8N609 369 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 TSACCQ96A04 125 aaPredicted RBP19.01■□□□□ 0.63
DDX55-211ENST00000544429 LRRC45Q96CN5 670 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 HIC2Q96JB3 615 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 ZSCAN5AQ9BUG6 496 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 CLPBQ9H078 707 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 SLC32A1Q9H598 525 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 IL26Q9NPH9 171 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 EIF2B3Q9NR50 452 aaKnown RBP19.01■□□□□ 0.63
DDX55-211ENST00000544429 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.01■□□□□ 0.63
DDX55-211ENST00000544429 KLQ9UEF7 1012 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 APOBEC3BQ9UH17 382 aaKnown RBP19.01■□□□□ 0.63
DDX55-211ENST00000544429 ARL5AQ9Y689 179 aa19.01■□□□□ 0.63
DDX55-211ENST00000544429 GOLGA4Q13439 2230 aaKnown RBP19.01■□□□□ 0.63
DDX55-211ENST00000544429 PRSS38A1L453 326 aa19■□□□□ 0.63
DDX55-211ENST00000544429 LDB2O43679 373 aa19■□□□□ 0.63
DDX55-211ENST00000544429 RASGRP1O95267 797 aa19■□□□□ 0.63
DDX55-211ENST00000544429 MAGEA6P43360 314 aa19■□□□□ 0.63
DDX55-211ENST00000544429 FNTAP49354 379 aa19■□□□□ 0.63
DDX55-211ENST00000544429 INAVAQ3KP66 663 aa19■□□□□ 0.63
DDX55-211ENST00000544429 HS1BP3Q53T59 392 aa19■□□□□ 0.63
DDX55-211ENST00000544429 ZDHHC20Q5W0Z9 365 aa19■□□□□ 0.63
DDX55-211ENST00000544429 CCDC137Q6PK04 289 aaKnown RBP19■□□□□ 0.63
DDX55-211ENST00000544429 LINC00523Q86TU6 105 aa19■□□□□ 0.63
DDX55-211ENST00000544429 TAB3Q8N5C8 712 aaPredicted RBP19■□□□□ 0.63
DDX55-211ENST00000544429 OR4C6Q8NH72 309 aa19■□□□□ 0.63
DDX55-211ENST00000544429 RHBDD1Q8TEB9 315 aa19■□□□□ 0.63
DDX55-211ENST00000544429 SETD7Q8WTS6 366 aaKnown RBP19■□□□□ 0.63
DDX55-211ENST00000544429 PTCD2Q8WV60 388 aaKnown RBP19■□□□□ 0.63
DDX55-211ENST00000544429 SLCO2A1Q92959 643 aa19■□□□□ 0.63
DDX55-211ENST00000544429 MRPL40Q9NQ50 206 aaKnown RBP19■□□□□ 0.63
DDX55-211ENST00000544429 TMPRSS11EQ9UL52 423 aa19■□□□□ 0.63
DDX55-211ENST00000544429 ZFC3H1O60293 1989 aaKnown RBP19■□□□□ 0.63
DDX55-211ENST00000544429 ARHGEF17Q96PE2 2063 aaPredicted RBP18.99■□□□□ 0.63
DDX55-211ENST00000544429 LMO7DNF2Z398 122 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 TRIM38O00635 465 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 TPP1O14773 563 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 AQP9O43315 295 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 DKK1O94907 266 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 SLC4A1P02730 911 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 IVLP07476 585 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 LPOP22079 712 aaPredicted RBP18.99■□□□□ 0.63
DDX55-211ENST00000544429 GRIA1P42261 906 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 NOVA1P51513 510 aaKnown RBP18.99■□□□□ 0.63
DDX55-211ENST00000544429 ZNF140P52738 457 aaPredicted RBP18.99■□□□□ 0.63
DDX55-211ENST00000544429 PRRT3Q5FWE3 981 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 PPM1JQ5JR12 505 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 PSAPL1Q6NUJ1 521 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 GSTA5Q7RTV2 222 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 DGLUCYQ7Z3D6 616 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 HID1Q8IV36 788 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 SDR16C5Q8N3Y7 309 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 VPS35Q96QK1 796 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 CDC6Q99741 560 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 SLC13A1Q9BZW2 595 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 BPIFA1Q9NP55 256 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 CASS4Q9NQ75 786 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 NLGN3Q9NZ94 848 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.99■□□□□ 0.63
DDX55-211ENST00000544429 VPS18Q9P253 973 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 SPASTQ9UBP0 616 aa18.99■□□□□ 0.63
DDX55-211ENST00000544429 OAS3Q9Y6K5 1087 aaKnown RBP18.99■□□□□ 0.63
DDX55-211ENST00000544429 GOLGA6L10A0A0M3HER8 536 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 C2orf81A6NN90 581 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 CRTAMO95727 393 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 APRTP07741 180 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 PDE1BQ01064 536 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 PTPRCAPQ14761 206 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 TRIP6Q15654 476 aaKnown RBP18.98■□□□□ 0.63
DDX55-211ENST00000544429 PROX2Q3B8N5 592 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 ALS2CLQ60I27 953 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 FSTL5Q8N475 847 aaPredicted RBP18.98■□□□□ 0.63
DDX55-211ENST00000544429 EID2Q8N6I1 236 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 FAM181AQ8N9Y4 354 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 SPATA16Q9BXB7 569 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 TOR4AQ9NXH8 423 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 RNF14Q9UBS8 474 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 PCYOX1Q9UHG3 505 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 PKP3Q9Y446 797 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 KCTD3Q9Y597 815 aa18.98■□□□□ 0.63
DDX55-211ENST00000544429 NEMP2A6NFY4 417 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms