RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 H7C0C1 242 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 PMPCBO75439 489 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 PNLIPP16233 465 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 GLB1P16278 677 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 GNPDA1P46926 289 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 ATP5OP48047 213 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 DCDC1P59894 354 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 LRP8Q14114 963 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 RBM44Q6ZP01 1051 aaKnown RBP23.13■■□□□ 1.29
CHFR-222ENST00000544093 LYSMD3Q7Z3D4 306 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 CDKL3Q8IVW4 592 aaPredicted RBP23.13■■□□□ 1.29
CHFR-222ENST00000544093 RNF10Q8N5U6 811 aaKnown RBP23.13■■□□□ 1.29
CHFR-222ENST00000544093 TSGA10Q9BZW7 698 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 DPEP2Q9H4A9 486 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 TRABDQ9H4I3 376 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 ZNF711Q9Y462 761 aa23.13■■□□□ 1.29
CHFR-222ENST00000544093 ARHGEF17Q96PE2 2063 aaPredicted RBP23.13■■□□□ 1.29
CHFR-222ENST00000544093 TAF4O00268 1085 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 CSO75390 466 aaKnown RBP23.12■■□□□ 1.29
CHFR-222ENST00000544093 STK10O94804 968 aaKnown RBP23.12■■□□□ 1.29
CHFR-222ENST00000544093 NFKB1P19838 968 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 CD68P34810 354 aaPredicted RBP23.12■■□□□ 1.29
CHFR-222ENST00000544093 MPP3Q13368 585 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 C14orf28Q4W4Y0 310 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 PERM1Q5SV97 790 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 CERCAMQ5T4B2 595 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 PDPK2PQ6A1A2 396 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 ITPRIPL1Q6GPH6 555 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 KDELC2Q7Z4H8 507 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 TMC3Q7Z5M5 1100 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 ZNF567Q8N184 647 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 ACTL9Q8TC94 416 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 PPP1R2P1Q96PQ5 205 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 DESI2Q9BSY9 194 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 ZSCAN5AQ9BUG6 496 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 GPR63Q9BZJ6 419 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 RMI1Q9H9A7 625 aa23.12■■□□□ 1.29
CHFR-222ENST00000544093 LOC285095A0A1B0GVY8 99 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 GOLGA6L9A6NEM1 432 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 ZW10O43264 779 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 NUDT21O43809 227 aaKnown RBP23.11■■□□□ 1.29
CHFR-222ENST00000544093 PTMAP06454 111 aaKnown RBP23.11■■□□□ 1.29
CHFR-222ENST00000544093 WNT3AP56704 352 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 OTUD4Q01804 1114 aaKnown RBP23.11■■□□□ 1.29
CHFR-222ENST00000544093 SPIDRQ14159 915 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 ISXQ2M1V0 245 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 DOK6Q6PKX4 331 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 GALNT13Q8IUC8 556 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 LSMEM2Q8N112 164 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 TTC13Q8NBP0 860 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 CCDC112Q8NEF3 446 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 ALG3Q92685 438 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 CCDC74AQ96AQ1 378 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 OR2M4Q96R27 311 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 AGAP2Q99490 1192 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 HACD3Q9P035 362 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 RSPH14Q9UHP6 348 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 APPL1Q9UKG1 709 aa23.11■■□□□ 1.29
CHFR-222ENST00000544093 DSPP15924 2871 aaKnown RBP23.11■■□□□ 1.29
CHFR-222ENST00000544093 B4DGG1 531 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 ANXA9O76027 345 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 FUCA1P04066 466 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 HLA-DPA1P20036 260 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 ADCY8P40145 1251 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 POLD2P49005 469 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 KDELC1Q6UW63 502 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 CCL4L1Q8NHW4 92 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 FSD1LQ9BXM9 530 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 UBP1Q9NZI7 540 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 TAAR2Q9P1P5 351 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 SHOC2Q9UQ13 582 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 GPSM3Q9Y4H4 160 aa23.1■■□□□ 1.29
CHFR-222ENST00000544093 GPR89AB7ZAQ6 455 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 TMX2-CTNND1H3BSU7 103 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 INPP4BO15327 924 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 KRT86O43790 486 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 NOBOXO60393 691 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 ASMTLO95671 621 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 GPR89BP0CG08 455 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 RBP3P10745 1247 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 PYGMP11217 842 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 RBL1P28749 1068 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 HMGCLP35914 325 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 EIF3EP60228 445 aaKnown RBP23.09■■□□□ 1.29
CHFR-222ENST00000544093 CTBSQ01459 385 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 HLTFQ14527 1009 aaKnown RBP eCLIP23.09■■□□□ 1.29
CHFR-222ENST00000544093 PYCR3Q53H96 274 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 ZNF569Q5MCW4 686 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 ZDHHC20Q5W0Z9 365 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 TRAM1L1Q8N609 369 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 ZDHHC1Q8WTX9 485 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 EID2BQ96D98 161 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 PLEKHG4BQ96PX9 1271 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 WDR24Q96S15 920 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 GBA3Q9H227 469 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 SUDS3Q9H7L9 328 aaPredicted RBP23.09■■□□□ 1.29
CHFR-222ENST00000544093 TMEM98Q9Y2Y6 226 aa23.09■■□□□ 1.29
CHFR-222ENST00000544093 ZFC3H1O60293 1989 aaKnown RBP23.09■■□□□ 1.29
CHFR-222ENST00000544093 NTN3O00634 580 aaPredicted RBP23.08■■□□□ 1.29
CHFR-222ENST00000544093 ARHGAP6O43182 974 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms