RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 DDX3XO00571 662 aaKnown RBP eCLIP22.48■■□□□ 1.195e-7■■■□□ 16.9
CDKN3-207ENST00000543789 CAPN5O15484 640 aaPredicted RBP22.48■■□□□ 1.19
CDKN3-207ENST00000543789 PDHA1P08559 390 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 MYBL1P10243 752 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 SERPINB6P35237 376 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 LRP8Q14114 963 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 ANKS6Q68DC2 871 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 ZNF765Q7L2R6 523 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 TRIM74Q86UV6 250 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 ZNF761Q86XN6 746 aaPredicted RBP22.48■■□□□ 1.19
CDKN3-207ENST00000543789 SFRP1Q8N474 314 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 SLC37A2Q8TED4 501 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 TRIM11Q96F44 468 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 TEFMQ96QE5 360 aaKnown RBP22.48■■□□□ 1.19
CDKN3-207ENST00000543789 NT5MQ9NPB1 228 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 AIPL1Q9NZN9 384 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 PILRAQ9UKJ1 303 aa22.48■■□□□ 1.19
CDKN3-207ENST00000543789 ARHGEF17Q96PE2 2063 aaPredicted RBP22.47■■□□□ 1.19
CDKN3-207ENST00000543789 DUX1O43812 170 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 FZD6O60353 706 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 RARAP10276 462 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 TCF4P15884 667 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 ZNF30P17039 623 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 ITKQ08881 620 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 SNAP47Q5SQN1 464 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 LRRC49Q8IUZ0 686 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 TEX26Q8N6G2 289 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 BMPERQ8N8U9 685 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 EXD1Q8NHP7 514 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 SLC45A3Q96JT2 553 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 AGAP2Q99490 1192 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 ZNHIT2Q9UHR6 403 aa22.47■■□□□ 1.19
CDKN3-207ENST00000543789 A8MU76 341 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 ASMTLO95671 621 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 MAP4P27816 1152 aaKnown RBP22.46■■□□□ 1.19
CDKN3-207ENST00000543789 MC2RQ01718 297 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 SRSF1Q07955 248 aaKnown RBP eCLIP22.46■■□□□ 1.19
CDKN3-207ENST00000543789 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.46■■□□□ 1.19
CDKN3-207ENST00000543789 WDR74Q6RFH5 385 aaPredicted RBP22.46■■□□□ 1.19
CDKN3-207ENST00000543789 NLGN4XQ8N0W4 816 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 NLGN4YQ8NFZ3 816 aaPredicted RBP22.46■■□□□ 1.19
CDKN3-207ENST00000543789 RTP4Q96DX8 246 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 COX14Q96I36 57 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 SMIM14Q96QK8 99 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 RIOK2Q9BVS4 552 aaKnown RBP22.46■■□□□ 1.19
CDKN3-207ENST00000543789 SPRY4Q9C004 299 aa22.46■■□□□ 1.19
CDKN3-207ENST00000543789 RTN4Q9NQC3 1192 aaKnown RBP22.46■■□□□ 1.19
CDKN3-207ENST00000543789 A0A0J9YYE9 177 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 INPP4BO15327 924 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 NKX2-8O15522 239 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 MAP3K6O95382 1288 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 EML2O95834 649 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 TRBC1P01850 177 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 MAN1A1P33908 653 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 PRKCIP41743 596 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 STC1P52823 247 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 EPHB1P54762 984 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 KLHL30Q0D2K2 578 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 PIGHQ14442 188 aaPredicted RBP22.45■■□□□ 1.18
CDKN3-207ENST00000543789 SKIDA1Q1XH10 827 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 ARHGAP22Q7Z5H3 698 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 TEKT4Q8WW24 435 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 KIAA1143Q96AT1 154 aaPredicted RBP22.45■■□□□ 1.18
CDKN3-207ENST00000543789 EFHD1Q9BUP0 239 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 POLR1EQ9GZS1 481 aaKnown RBP22.45■■□□□ 1.18
CDKN3-207ENST00000543789 GPN2Q9H9Y4 310 aaPredicted RBP22.45■■□□□ 1.18
CDKN3-207ENST00000543789 PCDH18Q9HCL0 1135 aa22.45■■□□□ 1.18
CDKN3-207ENST00000543789 SARS2Q9NP81 518 aaKnown RBP22.45■■□□□ 1.18
CDKN3-207ENST00000543789 CES1P23141 567 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 HHEXQ03014 270 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 NFATC2Q13469 925 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 E4F1Q66K89 784 aaPredicted RBP22.44■■□□□ 1.18
CDKN3-207ENST00000543789 TXNRD3NBQ6F5E7 133 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 IYDQ6PHW0 289 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 CEACAM20Q6UY09 585 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 AOPEPQ8N6M6 819 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 NCSTNQ92542 709 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 SH3KBP1Q96B97 665 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 CTRCQ99895 268 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 ZPBPQ9BS86 351 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 ISCUQ9H1K1 167 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 STN1Q9H668 368 aaKnown RBP22.44■■□□□ 1.18
CDKN3-207ENST00000543789 FBXO8Q9NRD0 319 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 DNPEPQ9ULA0 475 aa22.44■■□□□ 1.18
CDKN3-207ENST00000543789 DNAJC6O75061 913 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 CHST15Q7LFX5 561 aaPredicted RBP22.43■■□□□ 1.18
CDKN3-207ENST00000543789 RAVER1Q8IY67 606 aaKnown RBP22.43■■□□□ 1.18
CDKN3-207ENST00000543789 EPN3Q9H201 632 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 VPS18Q9P253 973 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 TBC1D29Q9UFV1 150 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 CHKBQ9Y259 395 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 PRKAB1Q9Y478 270 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 PCYT1BQ9Y5K3 369 aaPredicted RBP22.43■■□□□ 1.18
CDKN3-207ENST00000543789 NAV2Q8IVL1 2488 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 SDK2Q58EX2 2172 aa22.43■■□□□ 1.18
CDKN3-207ENST00000543789 ATP1A1P05023 1023 aaKnown RBP22.42■■□□□ 1.18
CDKN3-207ENST00000543789 PRKAR1AP10644 381 aa22.42■■□□□ 1.18
CDKN3-207ENST00000543789 SKILP12757 684 aa22.42■■□□□ 1.18
CDKN3-207ENST00000543789 IL4RP24394 825 aa22.42■■□□□ 1.18
CDKN3-207ENST00000543789 KRT81Q14533 505 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms