RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 IGF2-ASQ6U949 168 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 TMC3Q7Z5M5 1100 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 TRAM1L1Q8N609 369 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 LRRC57Q8N9N7 239 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 KYQ8NBH2 561 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 ACRBPQ8NEB7 543 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 MDM1Q8TC05 714 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 ZDHHC1Q8WTX9 485 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 KRT35Q92764 455 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 SCAMP4Q969E2 229 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 CCDC97Q96F63 343 aaPredicted RBP10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 COX14Q96I36 57 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 PLEKHG4BQ96PX9 1271 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 GFM1Q96RP9 751 aaKnown RBP10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 SPATA16Q9BXB7 569 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 CARD9Q9H257 536 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 POLR1BQ9H9Y6 1135 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 MRPL40Q9NQ50 206 aaKnown RBP10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 AKAP7Q9P0M2 348 aaPredicted RBP10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 SIRPGQ9P1W8 387 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 RSPH14Q9UHP6 348 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 FEZ2Q9UHY8 353 aaPredicted RBP10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 CD84Q9UIB8 345 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 ZNF711Q9Y462 761 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 GPSM3Q9Y4H4 160 aa10.22□□□□□ -0.77
NPIPB4-217ENST00000543449 TDRD6O60522 2096 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LOC285095A0A1B0GVY8 99 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 MACROD2A1Z1Q3 448 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 GRID2IPA4D2P6 1211 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 RCCD1A6NED2 376 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 OR5K4A6NMS3 321 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 RHPN2P1A8MT19 583 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 B4DGG1 531 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 NTN3O00634 580 aaPredicted RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 ARHGAP6O43182 974 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 USP12O75317 370 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 PMPCBO75439 489 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 SOD1P00441 154 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 CELA2BP08218 269 aaPredicted RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 NFKB1P19838 968 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 RBMS1P29558 406 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 HMGCLP35914 325 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 ADCY8P40145 1251 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 GPR3P46089 330 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 WNT3AP56704 352 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 EIF3EP60228 445 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 PDE1BQ01064 536 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 WASHC5Q12768 1159 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 GALNT3Q14435 633 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 HLTFQ14527 1009 aaKnown RBP eCLIP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 PYCR3Q53H96 274 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 DARS2Q6PI48 645 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LYSMD3Q7Z3D4 306 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 PHYKPLQ8IUZ5 450 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 CCNJLQ8IV13 435 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 TMEM139Q8IV31 216 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 ZNF567Q8N184 647 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 ARL14Q8N4G2 192 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 SPC24Q8NBT2 197 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 WDR36Q8NI36 951 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 SNIP1Q8TAD8 396 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 BRSK1Q8TDC3 778 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LRRN4Q8WUT4 740 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 FGF11Q92914 225 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 CCDC74AQ96AQ1 378 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 SH3KBP1Q96B97 665 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LIN37Q96GY3 246 aaPredicted RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 C19orf43Q9BQ61 176 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 HERPUD2Q9BSE4 406 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 HEMGNQ9BXL5 484 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 CEP41Q9BYV8 373 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 FRMD8P1Q9BZ68 369 aaPredicted RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 ZCCHC2Q9C0B9 1178 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 GBA3Q9H227 469 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LRRN3Q9H3W5 708 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 GOLPH3Q9H4A6 298 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 THSD1Q9NS62 852 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 TAAR2Q9P1P5 351 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LRIT1Q9P2V4 623 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 SAE1Q9UBE0 346 aaPredicted RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 REXO2Q9Y3B8 237 aaKnown RBP10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 PKP3Q9Y446 797 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 PCDHGA8Q9Y5G5 932 aa10.21□□□□□ -0.77
NPIPB4-217ENST00000543449 LRRK1Q38SD2 2015 aa10.21□□□□□ -0.78
NPIPB4-217ENST00000543449 KNTC1P50748 2209 aa10.21□□□□□ -0.78
NPIPB4-217ENST00000543449 A0A087WV48 116 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 CCDC187A0A096LP49 1063 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 INPP4BO15327 924 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 PSMD3O43242 534 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 VEGFDO43915 354 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 NOBOXO60393 691 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 KCNJ13O60928 360 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 SLC25A14O95258 325 aaPredicted RBP10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 MT-CYBP00156 380 aaPredicted RBP10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 RPLP0P05388 317 aaKnown RBP10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 RBP3P10745 1247 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 VCLP18206 1134 aa10.2□□□□□ -0.78
NPIPB4-217ENST00000543449 CCKBRP32239 447 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms