RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 NRXN3Q9Y4C0 1643 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 OR2AG2A6NM03 316 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 MATN3O15232 486 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 TMCC2O75069 709 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 FAM163BP0C2L3 166 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 FCGR1AP12314 374 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 KCNE1P15382 129 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 RABGGTBP53611 331 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 RPS24P62847 133 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CACNG1Q06432 222 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ALG11Q2TAA5 492 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 FGD3Q5JSP0 725 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 LUZP2Q86TE4 346 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 IRF2BP1Q8IU81 584 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CYP4Z2PQ8N1L4 340 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 DPP10Q8N608 796 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ACMSDQ8TDX5 336 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 STYXQ8WUJ0 223 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 METTL21AQ8WXB1 218 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 PSMG2Q969U7 264 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 TPD52L3Q96J77 140 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ACE2Q9BYF1 805 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 HAO1Q9UJM8 370 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 FBXW11Q9UKB1 542 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 INSL5Q9Y5Q6 135 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 GMEB1Q9Y692 573 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 C2CD4BA6NLJ0 364 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 TM7SF2O76062 418 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 TBX18O95935 607 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 EPORP19235 508 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 JAK1P23458 1154 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ASPAP45381 313 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CCR3P51677 355 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ECT2LQ008S8 904 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 LRRC32Q14392 662 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ZCWPW2Q504Y3 356 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 KDELC1Q6UW63 502 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 C16orf62Q7Z3J2 963 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CD101Q93033 1021 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 FUT8Q9BYC5 575 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 PHACTR1Q9C0D0 580 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 PALMDQ9NP74 551 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 CD84Q9UIB8 345 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ITGB1BP2Q9UKP3 347 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 SQORQ9Y6N5 450 aa6.88□□□□□ -1.31
SRGAP1-206ENST00000543397 ENPP3O14638 875 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 AXIN1O15169 862 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 PEX11AO75192 247 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 PRG2P13727 222 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 MRPS15P82914 257 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 GALK2Q01415 458 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ATP13A5Q4VNC0 1218 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 EOGTQ5NDL2 527 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 MBLAC2Q68D91 279 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 MAMDC4Q6UXC1 1216 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 LCN9Q8WX39 176 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ALG3Q92685 438 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 IGSF21Q96ID5 467 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CDH19Q9H159 772 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 TRIT1Q9H3H1 467 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 RHOJQ9H4E5 214 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 XPR1Q9UBH6 696 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 GMEB2Q9UKD1 530 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 KLHL20Q9Y2M5 609 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF780BQ9Y6R6 833 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ALADP13716 330 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 IFNGR2P38484 337 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 RXRGP48443 463 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 COL9A2Q14055 689 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ITIH4Q14624 930 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 NPY5RQ15761 445 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 C17orf99Q6UX52 265 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CHST15Q7LFX5 561 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 SCUBE1Q8IWY4 988 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 PTCD2Q8WV60 388 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 NACC2Q96BF6 587 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 SEPHS2Q99611 448 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC4A5Q9BY07 1137 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 GDF3Q9NR23 364 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 INVSQ9Y283 1065 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 AP3M1Q9Y2T2 418 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 MTF2Q9Y483 593 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 M0R3G1 203 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 FYNP06241 537 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 FAM153BP0C7A2 387 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ALAS2P22557 587 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 S100A5P33763 92 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CSKP41240 450 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CRATP43155 626 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 RPL38P63173 70 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF844Q08AG5 666 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 FAM153CQ494X1 144 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 APTXQ7Z2E3 356 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CFAP206Q8IYR0 622 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 DEFB107AQ8IZN7 70 aa6.87□□□□□ -1.31
SRGAP1-206ENST00000543397 CRYBG2Q8N1P7 616 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms