RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TERB1Q8NA31 727 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 LSM14AQ8ND56 463 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 WFIKKN2Q8TEU8 576 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TEKT4Q8WW24 435 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 GATA6Q92908 595 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 P2RY11Q96G91 374 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC74BQ96LY2 380 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PPP1R9BQ96SB3 815 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TREX2Q9BQ50 279 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MAGEB5Q9BZ81 275 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 NOL6Q9H6R4 1146 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CATSPERBQ9H7T0 1116 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 FBRSL1Q9HCM7 1045 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MPP6Q9NZW5 540 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 GGA2Q9UJY4 613 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 GUCA1BQ9UMX6 200 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SLC27A6Q9Y2P4 619 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ALG6Q9Y672 507 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 RIF1Q5UIP0 2472 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TICRRQ7Z2Z1 1910 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 KIF26AQ9ULI4 1882 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CACNA1BQ00975 2339 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 H7C0S8 307 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 K7EQS6 105 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 FGF10O15520 208 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PI15O43692 258 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ATG13O75143 517 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SKAP2O75563 359 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 URI1O94763 535 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 F13BP05160 661 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 APOA4P06727 396 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 DCNP07585 359 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 RHOCP08134 193 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CHRNB1P11230 501 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MYF5P13349 255 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 POLR2EP19388 210 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 AOC1P19801 751 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 HLA-FP30511 346 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CD70P32970 193 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MAGEA9P43362 315 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 RPS9P46781 194 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MAPKAPK2P49137 400 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ALDH9A1P49189 494 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 IRAK1P51617 712 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CDH6P55285 790 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TAS2R40P59535 323 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 LMAN2Q12907 356 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SLC12A1Q13621 1099 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 DMC1Q14565 340 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PLCL1Q15111 1095 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PDK2Q15119 407 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 DPYSL2Q16555 572 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 FSCBQ5H9T9 825 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MANEALQ5VSG8 457 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 LRRC38Q5VT99 294 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 KAZNQ674X7 775 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CWF19L1Q69YN2 538 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TXNRD3NBQ6F5E7 133 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CYP4V2Q6ZWL3 525 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 POLNQ7Z5Q5 900 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CPNE8Q86YQ8 564 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC105Q8IYK2 499 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC33Q8N5R6 958 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 BAHD1Q8TBE0 780 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 KIAA1524Q8TCG1 905 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 WFDC5Q8TCV5 224 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MAELQ96JY0 434 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 DHRS1Q96LJ7 313 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 OSBPL1AQ9BXW6 950 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TXLNGYQ9BZA5 131 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CIPCQ9C0C6 399 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC68Q9H2F9 335 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 OBP2BQ9NPH6 170 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 LZTFL1Q9NQ48 299 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 RBM12Q9NTZ6 932 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 DONSONQ9NYP3 566 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TRIM10Q9UDY6 481 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CGGBP1Q9UFW8 167 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PLA2G4CQ9UP65 541 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PPP2R2CQ9Y2T4 447 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 HYOU1Q9Y4L1 999 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 A0A0U1RQJ8 604 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 AQP7O14520 342 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ZSCAN12O43309 604 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 PAX4O43316 350 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 PSTPIP1O43586 416 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 PALMO75781 387 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 KRT1P04264 644 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ATP5BP06576 529 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 SNRPB2P08579 225 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ATP6V1B1P15313 513 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 GOT1P17174 413 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 CSKP41240 450 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 CD86P42081 329 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ECI1P42126 302 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 HCAR3P49019 387 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 MRPS21P82921 87 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms