RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 CAMK1GQ96NX5 476 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 AGAP2Q99490 1192 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 APOL2Q9BQE5 337 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 LRRC61Q9BV99 259 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 ETNK1Q9HBU6 452 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 EIF2B3Q9NR50 452 aaKnown RBP18.29■□□□□ 0.52
COPS7A-216ENST00000543170 NLGN3Q9NZ94 848 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 SLC17A4Q9Y2C5 497 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 SAR1BQ9Y6B6 198 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 MYLKQ15746 1914 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 PRSS38A1L453 326 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 C2orf81A6NN90 581 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 FADS2P1A8MWK0 482 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 SCAMP1O15126 338 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 ZNF185O15231 689 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 AQP9O43315 295 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 PHF2O75151 1096 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 USP12O75317 370 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 ALPPL2P10696 532 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 ETS1P14921 441 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 RPL22P35268 128 aaKnown RBP18.28■□□□□ 0.52
COPS7A-216ENST00000543170 KCNJ1P48048 391 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 TTC27Q6P3X3 843 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 OR4C6Q8NH72 309 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 OR1E3Q8WZA6 343 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 MAGOHBQ96A72 148 aaKnown RBP18.28■□□□□ 0.52
COPS7A-216ENST00000543170 DUSP23Q9BVJ7 150 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 AP1M1Q9BXS5 423 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 RAB6BQ9NRW1 208 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 UCKL1Q9NWZ5 548 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 PKP3Q9Y446 797 aa18.28■□□□□ 0.52
COPS7A-216ENST00000543170 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 E7EVH7 732 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 TPP1O14773 563 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 CRTAMO95727 393 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 TNFP01375 233 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 CEACAM5P06731 702 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 IVLP07476 585 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 ZSCAN5DPP0CG00 497 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 GIMD1P0DJR0 217 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 LPOP22079 712 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 COILP38432 576 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 SPAM1P38567 509 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 SPARCL1Q14515 664 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 ELOCQ15369 112 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 TRIP6Q15654 476 aaKnown RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 HS1BP3Q53T59 392 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 PRUNE1Q86TP1 453 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 HID1Q8IV36 788 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 TSACCQ96A04 125 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 SCARF2Q96GP6 870 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 VPS35Q96QK1 796 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 SPATA16Q9BXB7 569 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 TCEAL2Q9H3H9 227 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 SMARCAL1Q9NZC9 954 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 VPS18Q9P253 973 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 RNF14Q9UBS8 474 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 FTSJ1Q9UET6 329 aa18.27■□□□□ 0.52
COPS7A-216ENST00000543170 CNOT6Q9ULM6 557 aaKnown RBP18.27■□□□□ 0.52
COPS7A-216ENST00000543170 LMO7DNF2Z398 122 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 FANCGO15287 622 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 TNFSF14O43557 240 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 ZNF140P52738 457 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-216ENST00000543170 CDH17Q12864 832 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 PRRT3Q5FWE3 981 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 ALS2CLQ60I27 953 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 CCDC137Q6PK04 289 aaKnown RBP18.26■□□□□ 0.51
COPS7A-216ENST00000543170 CREG2Q8IUH2 290 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 TAB3Q8N5C8 712 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-216ENST00000543170 EID2Q8N6I1 236 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 FAM181AQ8N9Y4 354 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 LMX1AQ8TE12 382 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 GRK7Q8WTQ7 553 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 ARL5AQ9Y689 179 aa18.26■□□□□ 0.51
COPS7A-216ENST00000543170 GPR89AB7ZAQ6 455 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 GIPC1O14908 333 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 INPP4BO15327 924 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 STX7O15400 261 aaKnown RBP18.25■□□□□ 0.51
COPS7A-216ENST00000543170 GPR89BP0CG08 455 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 LMAN1P49257 510 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 ETF1P62495 437 aaKnown RBP18.25■□□□□ 0.51
COPS7A-216ENST00000543170 CDK16Q00536 496 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 PROX2Q3B8N5 592 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 KCTD16Q68DU8 428 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 LVRNQ6Q4G3 990 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 PHYKPLQ8IUZ5 450 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 C17orf53Q8N3J3 647 aaPredicted RBP18.25■□□□□ 0.51
COPS7A-216ENST00000543170 GLYATL1Q969I3 302 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 CNDP2Q96KP4 475 aaKnown RBP18.25■□□□□ 0.51
COPS7A-216ENST00000543170 CLPBQ9H078 707 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 CAAP1Q9H8G2 361 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 CYP4F12Q9HCS2 524 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 BPIFA1Q9NP55 256 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 IL26Q9NPH9 171 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 MRPL40Q9NQ50 206 aaKnown RBP18.25■□□□□ 0.51
COPS7A-216ENST00000543170 SMOXQ9NWM0 555 aa18.25■□□□□ 0.51
COPS7A-216ENST00000543170 TRNAU1APQ9NX07 287 aaKnown RBP18.25■□□□□ 0.51
COPS7A-216ENST00000543170 GLYATL1P3A0A0U1RQE8 302 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 TRIM38O00635 465 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 FFAR2O15552 330 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms