RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PAFAH1B3Q15102 231 aaKnown RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 PCBP1Q15365 356 aaKnown RBP eCLIP16.05■□□□□ 0.16
VARS2-212ENST00000542001 SIRPB2Q5JXA9 342 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 MARCH8Q5T0T0 291 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 METTL21CQ5VZV1 264 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 CAMK1DQ8IU85 385 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 RDH11Q8TC12 318 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 NR1H4Q96RI1 486 aaPredicted RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 GTF2IRD1Q9UHL9 959 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 ADAMTS6Q9UKP5 1117 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 CDK5RAP2Q96SN8 1893 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 KRT6AP02538 564 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 KRT6BP04259 564 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 TYMPP19971 482 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 ATP6V1E1P36543 226 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 KRT6CP48668 564 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 GALK1P51570 392 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 ARSDP51689 593 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 MLLT6P55198 1093 aaPredicted RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 SPIDRQ14159 915 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 SHKBP1Q8TBC3 707 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 TMEM74Q96NL1 305 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 FCRL5Q96RD9 977 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 SOX17Q9H6I2 414 aaPredicted RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 VRTNQ9H8Y1 702 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 PNPLA8Q9NP80 782 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.05■□□□□ 0.16
VARS2-212ENST00000542001 SLC22A3O75751 556 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 RPP40O75818 363 aaKnown RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 SLC25A14O95258 325 aaPredicted RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 CAPN1P07384 714 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 KCNE1P15382 129 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 DGKQP52824 942 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 HMGCS1Q01581 520 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 ROR2Q01974 943 aaKnown RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 TRMT11Q7Z4G4 463 aaKnown RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 GALNT5Q7Z7M9 940 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 DLG3Q92796 817 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 EIF2B3Q9NR50 452 aaKnown RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 COMMD8Q9NX08 183 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 MARCH4Q9P2E8 410 aaPredicted RBP16.05■□□□□ 0.16
VARS2-212ENST00000542001 LRRC42Q9Y546 428 aa16.05■□□□□ 0.16
VARS2-212ENST00000542001 A0A088AWK7 358 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 C5orf58C9J3I9 102 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 ABLIM1O14639 778 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 MTX2O75431 263 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 NDST3O95803 873 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 HLA-DPA1P20036 260 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 ZNF135P52742 658 aaPredicted RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 SP3Q02447 781 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 GALNT2Q10471 571 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 FAM43BQ6ZT52 329 aaPredicted RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 ARL14EPQ8N8R7 260 aaPredicted RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 NTAN1Q96AB6 310 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 BBS2Q9BXC9 721 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 AKTIPQ9H8T0 292 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 BLOC1S6Q9UL45 172 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 GABRQQ9UN88 632 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 KLF11O14901 512 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 RNASEH1O60930 286 aaKnown RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 TMCC1O94876 653 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 ATP5BP06576 529 aaKnown RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 EPB42P16452 691 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 AOC1P19801 751 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 TRIM25Q14258 630 aaKnown RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 GSTA3Q16772 222 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 CHST15Q7LFX5 561 aaPredicted RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 TMCO5AQ8N6Q1 288 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 NRG4Q8WWG1 115 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 GPR22Q99680 433 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 TTPALQ9BTX7 342 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 FAM126AQ9BYI3 521 aaPredicted RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 NDUFA13Q9P0J0 144 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 CD68P34810 354 aaPredicted RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 IRF8Q02556 426 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 ELAVL2Q12926 359 aaKnown RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 RABL3Q5HYI8 236 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 B3GNT6Q6ZMB0 384 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 NKAPQ8N5F7 415 aaKnown RBP16.04■□□□□ 0.16
VARS2-212ENST00000542001 ACTRT2Q8TDY3 377 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 CCDC106Q9BWC9 280 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 MRGBPQ9NV56 204 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 MYO10Q9HD67 2058 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 KIAA1551Q9HCM1 1747 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 DNAJC25-GNG10A0A024R161 153 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 UGT2B4P06133 528 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 GABRR2P28476 465 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 AIF1P55008 147 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 LIPEQ05469 1076 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 GRB14Q14449 540 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 FUT10Q6P4F1 479 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 EPGNQ6UW88 154 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 ARNTL2Q8WYA1 636 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 C9orf16Q9BUW7 83 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 IMPAD1Q9NX62 359 aa16.04■□□□□ 0.16
VARS2-212ENST00000542001 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 MATN2O00339 956 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 DCLK1O15075 740 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 ADSLP30566 484 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms