RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 MTNR1AP48039 350 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 RPL15P61313 204 aaKnown RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 TIAL1Q01085 375 aaKnown RBP eCLIP5.56□□□□□ -1.52
DDB1-219ENST00000541513 PTH1RQ03431 593 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 CXCL9Q07325 125 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 BNIP3Q12983 259 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 IKQ13123 557 aaPredicted RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 CFAP221Q4G0U5 840 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 FASTKD1Q53R41 847 aaKnown RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 RUNDC3AQ59EK9 446 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 HERC4Q5GLZ8 1057 aaPredicted RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 ATAD3BQ5T9A4 648 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 ARHGAP40Q5TG30 622 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 CDKAL1Q5VV42 579 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 FAM91A1Q658Y4 838 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 PMS2CLQ68D20 193 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 KCNV1Q6PIU1 500 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 OGFOD3Q6PK18 319 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 TEPPQ6URK8 271 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 MOXD1Q6UVY6 613 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 INTS8Q75QN2 995 aaKnown RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 ZNF551Q7Z340 670 aaPredicted RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 TRAPPC11Q7Z392 1133 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 ABI3BPQ7Z7G0 1075 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 VASH2Q86V25 355 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 ZNF280BQ86YH2 543 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 SPACA3Q8IXA5 215 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 FAM126BQ8IXS8 530 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 SPERTQ8NA61 448 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 FAM184AQ8NB25 1140 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 MCUQ8NE86 351 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 CNOT9Q92600 299 aaKnown RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 GATA6Q92908 595 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 SLAMF9Q96A28 289 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 HIST1H2AAQ96QV6 131 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 WRNIP1Q96S55 665 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 MYOCQ99972 504 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 VKORC1Q9BQB6 163 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 C1QTNF1Q9BXJ1 281 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 CLPBQ9H078 707 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 KCNH6Q9H252 994 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 PDZD7Q9H5P4 517 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 NGBQ9NPG2 151 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 SLC22A11Q9NSA0 550 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 PNPLA3Q9NST1 481 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 RNF181Q9P0P0 153 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 DLGAP2Q9P1A6 1054 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 VPS18Q9P253 973 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 ABI3Q9P2A4 366 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 TRIM10Q9UDY6 481 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 TRMT6Q9UJA5 497 aaKnown RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 NUDT5Q9UKK9 219 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 FBXW2Q9UKT8 454 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 ITGA11Q9UKX5 1188 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 PLEKHA6Q9Y2H5 1048 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 RAXQ9Y2V3 346 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 NAALAD2Q9Y3Q0 740 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 POLR2AP24928 1970 aaKnown RBP5.56□□□□□ -1.52
DDB1-219ENST00000541513 MYH2Q9UKX2 1941 aa5.56□□□□□ -1.52
DDB1-219ENST00000541513 ECM29Q5VYK3 1845 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 TTC41PQ6P2S7 1318 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 A0A1B0GUL7 405 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 A0A1B0GVM2 712 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 FAM95CA0A1B0GW59 222 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 A0A1W2PR77 199 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 TCRBV7S2A1N4TA0A589 114 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 LRRC53A6NM62 1247 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 F8WDY8 70 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 SNAP23O00161 211 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 KIAA0391O15091 583 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 CASC3O15234 703 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 CLDN3O15551 220 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 RGS10O43665 173 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 ECE2O60344 883 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 USP12O75317 370 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 NDUFS3O75489 264 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 IPO13O94829 963 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 STAMBPO95630 424 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 POLR2MP0CAP2 368 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 ARSAP15289 507 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 CTPS1P17812 591 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 TNFRSF1AP19438 455 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 DNAJB1P25685 340 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 PTPN4P29074 926 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 HIBADHP31937 336 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 SFNP31947 248 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 USP8P40818 1118 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 GATA4P43694 442 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 CENPAP49450 140 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 RTP1P59025 263 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 SRSF11Q05519 484 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 SYCP1Q15431 976 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 DPYSL2Q16555 572 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 KRT71Q3SY84 523 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 TDRD12Q587J7 1177 aaKnown RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 TMEM196Q5HYL7 178 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 ATG9BQ674R7 924 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 METAP1DQ6UB28 335 aaPredicted RBP5.55□□□□□ -1.52
DDB1-219ENST00000541513 C17orf99Q6UX52 265 aa5.55□□□□□ -1.52
DDB1-219ENST00000541513 PACS1Q6VY07 963 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms