RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PLEKHA8Q96JA3 519 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 CSF3RQ99062 836 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 DGCR6LQ9BY27 220 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ADNPQ9H2P0 1102 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ALG2Q9H553 416 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 MROH8Q9H579 483 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 ARMC1Q9NVT9 282 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 IFT80Q9P2H3 777 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 UXTQ9UBK9 157 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC27A5Q9Y2P5 690 aa10.33□□□□□ -0.76
CDC42SE1-207ENST00000540998 RALGAPA2Q2PPJ7 1873 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SUPT3HB4E1H0 165 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 H0Y858 1186 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CDC7O00311 574 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 AZIN1O14977 448 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CACNG3O60359 315 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 NOBOXO60393 691 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CLASP2O75122 1294 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 IL10P22301 178 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CCNCP24863 283 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 IL12AP29459 219 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 AXLP30530 894 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 IREB2P48200 963 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 HCAR3P49019 387 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 GEMP55040 296 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 TSNQ15631 228 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CYP2A13Q16696 494 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 RAB41Q5JT25 222 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SIRPB2Q5JXA9 342 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 ANKRD26P1Q6NSI1 321 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 KDELC1Q6UW63 502 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 DNAJC14Q6Y2X3 702 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 PCYOX1LQ8NBM8 494 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 OR2T11Q8NH01 316 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 NPLOC4Q8TAT6 608 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 TMEM125Q96AQ2 219 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 EXOC2Q96KP1 924 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 MYRFLQ96LU7 910 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 PPP1R10Q96QC0 940 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 HIPK3Q9H422 1215 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SMURF2Q9HAU4 748 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 TLR9Q9NR96 1032 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 TRNAU1APQ9NX07 287 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 HS3ST4Q9Y661 456 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 GOT2P00505 430 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 C1RP00736 705 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CD1DP15813 335 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 PAMP19021 973 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 FSHRP23945 695 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 RPS9P46781 194 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SERPINH1P50454 418 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 NUP107P57740 925 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 HERVK_113P63132 956 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC44A4Q53GD3 710 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 UTS2BQ765I0 119 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 RBM12BQ8IXT5 1001 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CENPSQ8N2Z9 138 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 PGBD5Q8N414 524 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 DHRSXQ8N5I4 330 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 MYEOVQ96EZ4 313 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CENPNQ96H22 339 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 FAM210AQ96ND0 272 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 BIRC8Q96P09 236 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 KCTD14Q9BQ13 255 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 ERVK-6Q9BXR3 956 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SEZ6LQ9BYH1 1024 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CARS2Q9HA77 564 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 INVSQ9Y283 1065 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 OAS3Q9Y6K5 1087 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SQORQ9Y6N5 450 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 E9PAM4 449 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 MUSKO15146 869 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SYNCRIPO60506 623 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 B3GAT3O94766 335 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 MMP2P08253 660 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 BMP1P13497 986 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 HRH2P25021 359 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 LEPRP48357 1165 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 DGKQP52824 942 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 C21orf59P57076 290 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 LSM3P62310 102 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 TUBA4AP68366 448 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 ITGADQ13349 1161 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 INPP5AQ14642 412 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 PSMD5Q16401 504 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 PIK3R6Q5UE93 754 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 SCN4BQ8IWT1 228 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 ANKRD13AQ8IZ07 590 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 CLYBLQ8N0X4 340 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 AFAP1L2Q8N4X5 818 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 ACDQ96AP0 544 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 FAM124BQ9H5Z6 455 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 PRDM8Q9NQV8 689 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 ENTPD7Q9NQZ7 604 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 ZNF225Q9UK10 706 aa10.32□□□□□ -0.76
CDC42SE1-207ENST00000540998 COL1A2P08123 1366 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 XIRP2A4UGR9 3374 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 CCDC162PA2VCL2 907 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 IRAK2O43187 625 aa10.31□□□□□ -0.76
CDC42SE1-207ENST00000540998 ADAM23O75077 832 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms