RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 PCID2Q5JVF3 399 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 MPP7Q5T2T1 576 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 GRTP1Q5TC63 336 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 HHATQ5VTY9 493 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 C1QL3Q5VWW1 255 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 FBXL22Q6P050 247 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 TIFABQ6ZNK6 161 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 PRUNE1Q86TP1 453 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 NLRP14Q86W24 1093 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 ZNF354CQ86Y25 554 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 CTAGE3PQ8IX95 158 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 PHTF2Q8N3S3 785 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 EID2Q8N6I1 236 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 PPHLN1Q8NEY8 458 aaKnown RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 UHMK1Q8TAS1 419 aaKnown RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 CALML6Q8TD86 181 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 CFAP36Q96G28 342 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 MRGPRX1Q96LB2 322 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 SIGLEC10Q96LC7 697 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 AGAP3Q96P47 875 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 CPNE1Q99829 537 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 PRMT1Q99873 361 aaKnown RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 C10orf88Q9H8K7 445 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 RBM22Q9NW64 420 aaKnown RBP eCLIP8.4□□□□□ -1.06
CHD4-208ENST00000540960 MOCS1Q9NZB8 636 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 MID2Q9UJV3 735 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 STOML2Q9UJZ1 356 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 DOCK9Q9BZ29 2069 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 APCP25054 2843 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 TRAV19A0A0A6YYK7 116 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 A0A1W2PNU3 283 aaPredicted RBP8.39□□□□□ -1.07
CHD4-208ENST00000540960 WIPF3A6NGB9 483 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 FAM159BA6NKW6 160 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 PFDN6O15212 129 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 KIAA0754O94854 1291 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 CYBBP04839 570 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 CDK4P11802 303 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 CHN1P15882 459 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 HMGA1P17096 107 aaKnown RBP8.39□□□□□ -1.07
CHD4-208ENST00000540960 NFKB1P19838 968 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 ALDH3A1P30838 453 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 SSTR1P30872 391 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 SPRP35270 261 aaPredicted RBP8.39□□□□□ -1.07
CHD4-208ENST00000540960 TNFRSF4P43489 277 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 GPR15P49685 360 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 GYS2P54840 703 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 GPX6P59796 221 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 PDE1BQ01064 536 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 SLC20A2Q08357 652 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 CLN3Q13286 438 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 ZNF235Q14590 738 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 CLCA4Q14CN2 919 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 SHBQ15464 509 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 PIK3R6Q5UE93 754 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 SDHAF4Q5VUM1 108 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 KCTD11Q693B1 232 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 PDPK2PQ6A1A2 396 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 UNC5AQ6ZN44 842 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 MARK2Q7KZI7 788 aaKnown RBP8.39□□□□□ -1.07
CHD4-208ENST00000540960 TAX1BP1Q86VP1 789 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 ARHGAP12Q8IWW6 846 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 ZNF683Q8IZ20 524 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 LGI2Q8N0V4 545 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 CACTIN-AS1Q8N1I8 211 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 TEX26Q8N6G2 289 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 NPWQ8N729 165 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 PPM1NQ8N819 430 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 HJURPQ8NCD3 748 aaPredicted RBP8.39□□□□□ -1.07
CHD4-208ENST00000540960 RAB3IL1Q8TBN0 382 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 SPOCK2Q92563 424 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 IGSF8Q969P0 613 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 MAGEB18Q96M61 343 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 TSNARE1Q96NA8 513 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 TBL1YQ9BQ87 522 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 SLC39A8Q9C0K1 460 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 POLR1EQ9GZS1 481 aaKnown RBP8.39□□□□□ -1.07
CHD4-208ENST00000540960 SLC25A18Q9H1K4 315 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 VPS11Q9H270 941 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 ARNT2Q9HBZ2 717 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 PPANQ9NQ55 473 aaKnown RBP8.39□□□□□ -1.07
CHD4-208ENST00000540960 TMPRSS4Q9NRS4 437 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 OSER1Q9NX31 292 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 MKS1Q9NXB0 559 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 EURLQ9NYK6 297 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 ZFATQ9P243 1243 aa8.39□□□□□ -1.07
CHD4-208ENST00000540960 TCRBV7S3A2A0A539 114 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 HEATR9A2RTY3 570 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 PMS2P1A4D2B8 440 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 TRIM24O15164 1050 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 COCHO43405 550 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 PRAMEF11O60813 436 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 USP12O75317 370 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 AGFG2O95081 481 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 LUC7L3O95232 432 aaKnown RBP8.38□□□□□ -1.07
CHD4-208ENST00000540960 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 OAS1P00973 400 aaKnown RBP8.38□□□□□ -1.07
CHD4-208ENST00000540960 APOA4P06727 396 aa8.38□□□□□ -1.07
CHD4-208ENST00000540960 MBL2P11226 248 aaPredicted RBP8.38□□□□□ -1.07
CHD4-208ENST00000540960 HDCP19113 662 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms