RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TMEM168Q9H0V1 697 aa16.8■□□□□ 0.28
CD9-209ENST00000540891 NFKBIL1Q9UBC1 381 aaPredicted RBP16.8■□□□□ 0.28
CD9-209ENST00000540891 TMEM98Q9Y2Y6 226 aa16.8■□□□□ 0.28
CD9-209ENST00000540891 PTPRBP23467 1997 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 LIASO43766 372 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 ZNF189O75820 626 aaPredicted RBP16.79■□□□□ 0.28
CD9-209ENST00000540891 METTL18O95568 372 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 PYGLP06737 847 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 IVLP07476 585 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 BPIP17213 487 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 ALS2CLQ60I27 953 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 DOK6Q6PKX4 331 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 RANBP10Q6VN20 620 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 MARCH9Q86YJ5 346 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 SDR16C5Q8N3Y7 309 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 HIC2Q96JB3 615 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 SRPK1Q96SB4 655 aaKnown RBP16.79■□□□□ 0.28
CD9-209ENST00000540891 FSD1LQ9BXM9 530 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 CARS2Q9HA77 564 aaKnown RBP16.79■□□□□ 0.28
CD9-209ENST00000540891 MOSPD1Q9UJG1 213 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 SUFUQ9UMX1 484 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 MSRB2Q9Y3D2 182 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 PCYT1BQ9Y5K3 369 aaPredicted RBP16.79■□□□□ 0.28
CD9-209ENST00000540891 ST14Q9Y5Y6 855 aa16.79■□□□□ 0.28
CD9-209ENST00000540891 OAS3Q9Y6K5 1087 aaKnown RBP16.79■□□□□ 0.28
CD9-209ENST00000540891 SCN8AQ9UQD0 1980 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 FGF1P05230 155 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 HMGCLP35914 325 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 MSLNQ13421 630 aaPredicted RBP16.78■□□□□ 0.28
CD9-209ENST00000540891 KCTD11Q693B1 232 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 GUSBP11Q6P575 273 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 LVRNQ6Q4G3 990 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 GKN2Q86XP6 184 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 NRROSQ86YC3 692 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 SFTPA2Q8IWL1 248 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 GPBAR1Q8TDU6 330 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 C1orf54Q8WWF1 131 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 GATA6Q92908 595 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 RTP4Q96DX8 246 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 CNTNAP3BQ96NU0 1288 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 APOL2Q9BQE5 337 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 CNTNAP3Q9BZ76 1288 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 TRABDQ9H4I3 376 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
CD9-209ENST00000540891 BPIFA1Q9NP55 256 aa16.78■□□□□ 0.28
CD9-209ENST00000540891 AAR2Q9Y312 384 aaKnown RBP16.78■□□□□ 0.28
CD9-209ENST00000540891 PLXNB3Q9ULL4 1909 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 EME2A4GXA9 379 aaPredicted RBP16.77■□□□□ 0.28
CD9-209ENST00000540891 FAM149AA5PLN7 773 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 ATP1A1P05023 1023 aaKnown RBP16.77■□□□□ 0.28
CD9-209ENST00000540891 CDK4P11802 303 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 GNPDA1P46926 289 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 INSM1Q01101 510 aaPredicted RBP16.77■□□□□ 0.28
CD9-209ENST00000540891 SPARCL1Q14515 664 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 PRPSAP1Q14558 356 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 PARP6Q2NL67 630 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 DENND5AQ6IQ26 1287 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 CCNI2Q6ZMN8 369 aaPredicted RBP16.77■□□□□ 0.28
CD9-209ENST00000540891 TRAM1L1Q8N609 369 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 BLOC1S5Q8TDH9 187 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 FRMD8P1Q9BZ68 369 aaPredicted RBP16.77■□□□□ 0.28
CD9-209ENST00000540891 CDH19Q9H159 772 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 TRNAU1APQ9NX07 287 aaKnown RBP16.77■□□□□ 0.28
CD9-209ENST00000540891 HACD3Q9P035 362 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 IL17CQ9P0M4 197 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 DOLKQ9UPQ8 538 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 PLEKHM1Q9Y4G2 1056 aa16.77■□□□□ 0.28
CD9-209ENST00000540891 C1QTNF9BB2RNN3 333 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 BUD23O43709 281 aaKnown RBP16.76■□□□□ 0.27
CD9-209ENST00000540891 DNAJC6O75061 913 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 USP12O75317 370 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 GP1BAP07359 652 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 C1QTNF9P0C862 333 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 AK4P27144 223 aaPredicted RBP16.76■□□□□ 0.27
CD9-209ENST00000540891 CXCR5P32302 372 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 TNNT3P45378 269 aaPredicted RBP16.76■□□□□ 0.27
CD9-209ENST00000540891 DUSP3P51452 185 aaPredicted RBP16.76■□□□□ 0.27
CD9-209ENST00000540891 NR0B2Q15466 257 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 PYCR3Q53H96 274 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 PERM1Q5SV97 790 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 HES3Q5TGS1 186 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 OGFOD3Q6PK18 319 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 ARHGEF18Q6ZSZ5 1173 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 MARK2Q7KZI7 788 aaKnown RBP16.76■□□□□ 0.27
CD9-209ENST00000540891 GLT6D1Q7Z4J2 308 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 TAF8Q7Z7C8 310 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 TMPRSS12Q86WS5 348 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 GALNT15Q8N3T1 639 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 ARL10Q8N8L6 244 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 KYQ8NBH2 561 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 IFI44Q8TCB0 444 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 PPP1R2P1Q96PQ5 205 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 PLEKHG4BQ96PX9 1271 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 ZSCAN5AQ9BUG6 496 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 SPATA16Q9BXB7 569 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 RAD18Q9NS91 495 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 NCKIPSDQ9NZQ3 722 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 SIRPGQ9P1W8 387 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 VPS18Q9P253 973 aa16.76■□□□□ 0.27
CD9-209ENST00000540891 TMPRSS11EQ9UL52 423 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms