RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FAM129CQ86XR2 697 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 PSTKQ8IV42 348 aaKnown RBP7.26□□□□□ -1.25
YBX3-209ENST00000540747 UNC5BQ8IZJ1 945 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 MCOLN2Q8IZK6 566 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 PIH1D2Q8WWB5 315 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 NUDCD1Q96RS6 583 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 CTRCQ99895 268 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 EFHD1Q9BUP0 239 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 ABCG8Q9H221 673 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 TRIT1Q9H3H1 467 aaKnown RBP7.26□□□□□ -1.25
YBX3-209ENST00000540747 SUDS3Q9H7L9 328 aaPredicted RBP7.26□□□□□ -1.25
YBX3-209ENST00000540747 SP110Q9HB58 689 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 SARS2Q9NP81 518 aaKnown RBP7.26□□□□□ -1.25
YBX3-209ENST00000540747 NLRC4Q9NPP4 1024 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 RRAGDQ9NQL2 400 aaPredicted RBP7.26□□□□□ -1.25
YBX3-209ENST00000540747 CNOT6Q9ULM6 557 aaKnown RBP7.26□□□□□ -1.25
YBX3-209ENST00000540747 PHTF1Q9UMS5 762 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 TP53TG5Q9Y2B4 290 aa7.26□□□□□ -1.25
YBX3-209ENST00000540747 CSMD1Q96PZ7 3565 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 A0A0U1RQS6 177 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 TMEM191CA6NGB0 347 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 ESPNB1AK53 854 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 DFFAO00273 331 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 MAFKO60675 156 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 DNAJC6O75061 913 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 PGLSO95336 258 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 MAP3K6O95382 1288 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 C9P02748 559 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 PDGFAP04085 211 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 FURINP09958 794 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 NR1D1P20393 614 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 ZNF135P52742 658 aaPredicted RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 STC1P52823 247 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 EPHA4P54764 986 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 UBE2IP63279 158 aaKnown RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 MC1RQ01726 317 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 DEFB109BQ30KR1 87 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 RALGPS1Q5JS13 557 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 ERMARDQ5T6L9 678 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 HIST2H2BCQ6DN03 193 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 ALG1LQ6GMV1 187 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 RAET1GQ6H3X3 334 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 IYDQ6PHW0 289 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 DOK6Q6PKX4 331 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 APTXQ7Z2E3 356 aaKnown RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 TRIM74Q86UV6 250 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 LZTR1Q8N653 840 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 OR10G6Q8NH81 332 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 FNIP1Q8TF40 1166 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 SCAMP4Q969E2 229 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 KIAA1143Q96AT1 154 aaPredicted RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 SMIM14Q96QK8 99 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 WDR24Q96S15 920 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 AGAP2Q99490 1192 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 AGPAT1Q99943 283 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 TRIM7Q9C029 511 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 DHX35Q9H5Z1 703 aaKnown RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 ETNK2Q9NVF9 386 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 TAS2R14Q9NYV8 317 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 OGFRQ9NZT2 677 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 CWC15Q9P013 229 aaKnown RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 VPS18Q9P253 973 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 TBC1D29Q9UFV1 150 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 TMEM98Q9Y2Y6 226 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 KCTD3Q9Y597 815 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 MRPS18BQ9Y676 258 aaKnown RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 OAS3Q9Y6K5 1087 aaKnown RBP7.25□□□□□ -1.25
YBX3-209ENST00000540747 SHANK1Q9Y566 2161 aa7.25□□□□□ -1.25
YBX3-209ENST00000540747 OTOGQ6ZRI0 2925 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 ANKRD62A6NC57 917 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 LILRA5A6NI73 299 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 PES1O00541 588 aaKnown RBP7.24□□□□□ -1.25
YBX3-209ENST00000540747 LRCH4O75427 683 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 RECKO95980 971 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 PRLP01236 227 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 PDHA1P08559 390 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 RNF224P0DH78 156 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 CYP2A6P11509 494 aaPredicted RBP7.24□□□□□ -1.25
YBX3-209ENST00000540747 ATP1A3P13637 1013 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 ZNF28P17035 718 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 TCN2P20062 427 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 MIPP30301 263 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 GPR1P46091 355 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 UQCRFS1P47985 274 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 PMS2P54278 862 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 HHEXQ03014 270 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 PTSQ03393 145 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 LAMB3Q13751 1172 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 ZNF235Q14590 738 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 SYCP1Q15431 976 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 DPYSL2Q16555 572 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 C4orf17Q53FE4 359 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 LRRC66Q68CR7 880 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 CAPRIN2Q6IMN6 1127 aaKnown RBP7.24□□□□□ -1.25
YBX3-209ENST00000540747 ACAD10Q6JQN1 1059 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 DCUN1D2Q6PH85 259 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 IRF2BP2Q7Z5L9 587 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 GALNT13Q8IUC8 556 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 RAVER1Q8IY67 606 aaKnown RBP7.24□□□□□ -1.25
YBX3-209ENST00000540747 NRSN1Q8IZ57 195 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms