RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PANX2Q96RD6 677 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 HERPUD2Q9BSE4 406 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 PACSIN1Q9BY11 444 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.34□□□□□ -0.75
CDCA3-208ENST00000540683 ZCCHC2Q9C0B9 1178 aaKnown RBP10.34□□□□□ -0.75
CDCA3-208ENST00000540683 TMEM168Q9H0V1 697 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 ZFYVE1Q9HBF4 777 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 SPTLC3Q9NUV7 552 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 HACD3Q9P035 362 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 TAAR2Q9P1P5 351 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 TRHDEQ9UKU6 1024 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 SUFUQ9UMX1 484 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 SATB2Q9UPW6 733 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 PCDHB1Q9Y5F3 818 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 LRP4O75096 1905 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 HGSO14964 777 aaPredicted RBP10.33□□□□□ -0.76
CDCA3-208ENST00000540683 KCNJ13O60928 360 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 EPOP01588 193 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 HLA-DQB2P05538 268 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 COMTP21964 271 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 LHCGRP22888 699 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ADCY8P40145 1251 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ACTR1BP42025 376 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 CD86P42081 329 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 SPINT3P49223 89 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ACTR1AP61163 376 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 CDK18Q07002 472 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ATP13A4Q4VNC1 1196 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 TEX44Q53QW1 395 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ZNF569Q5MCW4 686 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 PERM1Q5SV97 790 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 CCDC181Q5TID7 509 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 XKR5Q6UX68 686 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 SPRED1Q7Z699 444 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 CLEC14AQ86T13 490 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 MARCH9Q86YJ5 346 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 CCDC50Q8IVM0 306 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 KATNAL2Q8IYT4 538 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 OR10G6Q8NH81 332 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ARRDC2Q8TBH0 407 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 IMP4Q96G21 291 aaKnown RBP10.33□□□□□ -0.76
CDCA3-208ENST00000540683 WBP1Q96G27 269 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 AHCYL2Q96HN2 611 aaKnown RBP10.33□□□□□ -0.76
CDCA3-208ENST00000540683 MRFAP1L1Q96HT8 127 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 FCRL3Q96P31 734 aaPredicted RBP10.33□□□□□ -0.76
CDCA3-208ENST00000540683 CHP1Q99653 195 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 LGR4Q9BXB1 951 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 GPR63Q9BZJ6 419 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ABCG8Q9H221 673 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 EPB41L5Q9HCM4 733 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 MRPL40Q9NQ50 206 aaKnown RBP10.33□□□□□ -0.76
CDCA3-208ENST00000540683 NFKBIL1Q9UBC1 381 aaPredicted RBP10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ZNHIT2Q9UHR6 403 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 EFR3BQ9Y2G0 817 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 PCDHB11Q9Y5F2 797 aa10.33□□□□□ -0.76
CDCA3-208ENST00000540683 ASXL3Q9C0F0 2248 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 KIR2DS5A0A0G2JLQ3 304 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 A0A0G2JNG1 304 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 TTC24A2A3L6 582 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CCDC66A2RUB6 948 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 KLHL33A6NCF5 533 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 KIR2DS3K7RE56 304 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 KCNK1O00180 336 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 NOBOXO60393 691 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 TNFSF15O95150 251 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 LCA5LO95447 670 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 NDST3O95803 873 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PTMAP06454 111 aaKnown RBP10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PDHA1P08559 390 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 GM2AP17900 193 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CTNNA2P26232 953 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CDKN2BP42772 138 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PPM1FP49593 454 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-208ENST00000540683 NAP1L1P55209 391 aaKnown RBP10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CCL7P80098 99 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PDE1BQ01064 536 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CTBSQ01459 385 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 TLE3Q04726 772 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CCDC173Q0VFZ6 552 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 TBX2Q13207 712 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-208ENST00000540683 XRCC4Q13426 336 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 SQSTM1Q13501 440 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 GTF2H3Q13889 308 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 KIR2DS5Q14953 304 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 NR1D2Q14995 579 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PPP2R5EQ16537 467 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 ITPRIPL1Q6GPH6 555 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CYB5D1Q6P9G0 228 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 FOXR1Q6PIV2 292 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 ZNF438Q7Z4V0 828 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 DAAM2Q86T65 1068 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 SLC9B2Q86UD5 537 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 TSPAN33Q86UF1 283 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 SPACA3Q8IXA5 215 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 SYCE1Q8N0S2 351 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 DTX3LQ8TDB6 740 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 BRSK1Q8TDC3 778 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 COX14Q96I36 57 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms