RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 HASPINQ8TF76 798 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 ABTB1Q969K4 478 aaPredicted RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 TMEM125Q96AQ2 219 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 TBATAQ96M53 351 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 TFB2MQ9H5Q4 396 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 CXorf21Q9HAI6 301 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 NUDT5Q9UKK9 219 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 GPR45Q9Y5Y3 372 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 A0A1W2PP18 115 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 DYTNA2CJ06 578 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 C9JVG2 144 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 CD3EAPO15446 510 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 CLOCKO15516 846 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 B3GAT3O94766 335 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 SEC24DO94855 1032 aaPredicted RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 ATXN1LP0C7T5 689 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 LINC00032P0C843 101 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 CHRM3P20309 590 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 BRCC3P46736 316 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 ENTPD1P49961 510 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 TNK2Q07912 1038 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 CYP51A1Q16850 503 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 PIK3R6Q5UE93 754 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 ABRAXAS1Q6UWZ7 409 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 PTRH1Q86Y79 214 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 LRRC43Q8N309 656 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 PAPD5Q8NDF8 572 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 CYGBQ8WWM9 190 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 NSUN5Q96P11 429 aaKnown RBP12.25□□□□□ -0.45
NPC1-202ENST00000540608 KCNA7Q96RP8 456 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 ATOH8Q96SQ7 321 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 NMUR1Q9HB89 426 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 CDC14AQ9UNH5 594 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 CROCCQ5TZA2 2017 aa12.25□□□□□ -0.45
NPC1-202ENST00000540608 BRCA2P51587 3418 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 TCRBV5S2A0A599 114 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 SNAP91O60641 907 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 CHRNA1P02708 482 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 HAPLN1P10915 354 aaPredicted RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 UMPSP11172 480 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 ZNF37AP17032 561 aaPredicted RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 RHOQP17081 205 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 RFC2P35250 354 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 CAPGP40121 348 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 GRIK2Q13002 908 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 SPATA19Q7Z5L4 167 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 PATL1Q86TB9 770 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 ZNF683Q8IZ20 524 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 ARRDC2Q8TBH0 407 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 PABPC5Q96DU9 382 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 SERPINB11Q96P15 392 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 DOK1Q99704 481 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 UXTQ9UBK9 157 aaPredicted RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 FADS3Q9Y5Q0 445 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 KANSL1LA0AUZ9 987 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 H3BMM5 538 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 M0QZ92 97 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 INPP4BO15327 924 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 CLASP2O75122 1294 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 GOT2P00505 430 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 GRIK1P39086 918 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 MRPL19P49406 292 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 GSK3BP49841 420 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 SCNN1BP51168 640 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 CLCQ05315 142 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 PMS2P3Q13401 168 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 IRF5Q13568 498 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 OGFOD2Q6N063 350 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 MRNIPQ6NTE8 343 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 DUS1LQ6P1R4 473 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 ELMSAN1Q6PJG2 1045 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 CD300LGQ6UXG3 332 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 TFAP2DQ7Z6R9 452 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 TBC1D21Q8IYX1 336 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 THEM5Q8N1Q8 247 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 DHRSXQ8N5I4 330 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 PEX13Q92968 403 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 FBXL20Q96IG2 436 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 YTHDF1Q9BYJ9 559 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 ZYG11BQ9C0D3 744 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 ALG2Q9H553 416 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 SP110Q9HB58 689 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 PRDM5Q9NQX1 630 aaPredicted RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 TBCCD1Q9NVR7 557 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 SMPD3Q9NY59 655 aaPredicted RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 TRPV2Q9Y5S1 764 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 OAS3Q9Y6K5 1087 aaKnown RBP12.24□□□□□ -0.45
NPC1-202ENST00000540608 A0A1W2PQH9 124 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 M0QZQ0 153 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 EI24O14681 340 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 MAGEB3O15480 346 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 POMCP01189 267 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 DCKP27707 260 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 DIO3P55073 304 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 LCP2Q13094 533 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 NFYCQ13952 458 aa12.24□□□□□ -0.45
NPC1-202ENST00000540608 CYBRD1Q53TN4 286 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms