RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ATXN10Q9UBB4 475 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 KLQ9UEF7 1012 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 INVSQ9Y283 1065 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 FAM20BO75063 409 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 TRMUO75648 421 aaKnown RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 TBX18O95935 607 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 MT-CYBP00156 380 aaPredicted RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 CCL5P13501 91 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PSEN1P49768 467 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 OLIG2Q13516 323 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PSMD5Q16401 504 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PRMT9Q6P2P2 845 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 GCNT7Q6ZNI0 430 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF621Q6ZSS3 439 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 SYTL1Q8IYJ3 562 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 GALNT15Q8N3T1 639 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 SPPL2BQ8TCT7 592 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PLEKHA8Q96JA3 519 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 SIGLEC10Q96LC7 697 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PHF12Q96QT6 1004 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 HAPLN3Q96S86 360 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 OSBPL11Q9BXB4 747 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 SEZ6LQ9BYH1 1024 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 CLK4Q9HAZ1 481 aaKnown RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PNPLA3Q9NST1 481 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ZNHIT2Q9UHR6 403 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 TMEM114B3SHH9 223 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 TMEM189-UBE2V1I3L0A0 370 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 CYBBP04839 570 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 MLNP12872 115 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 ALOX12P18054 663 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 MAGP20916 626 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 IDH2P48735 452 aaKnown RBP9.96□□□□□ -0.81
TRAF1-202ENST00000540010 HK2P52789 917 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 MPP1Q00013 466 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 TLE2Q04725 743 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 IKBKEQ14164 716 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 SQLEQ14534 574 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 NR1D2Q14995 579 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 PTPRNQ16849 979 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 AARS2Q5JTZ9 985 aaKnown RBP9.96□□□□□ -0.81
TRAF1-202ENST00000540010 SCD5Q86SK9 330 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 CUZD1Q86UP6 607 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 GPSM1Q86YR5 675 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 STX19Q8N4C7 294 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 STAG3L4Q8TBR4 150 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 C8orf48Q96LL4 319 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 SEMA3CQ99985 751 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 PCDHAC1Q9H158 963 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 RMND5AQ9H871 391 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 BPIFA1Q9NP55 256 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 TMEM39AQ9NV64 488 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 LSM7Q9UK45 103 aaKnown RBP9.96□□□□□ -0.81
TRAF1-202ENST00000540010 VWA7Q9Y334 891 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 CCDC189A1A4V9 331 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 NEMP2A6NFY4 417 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 MGAT4DA6NG13 374 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 E9PAM4 449 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 RPL17P18621 184 aaKnown RBP9.96□□□□□ -0.81
TRAF1-202ENST00000540010 WNT3AP56704 352 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 LDLRAP1Q5SW96 308 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 ABRAXAS1Q6UWZ7 409 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 TMEM26Q6ZUK4 368 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 DDX53Q86TM3 631 aaKnown RBP9.96□□□□□ -0.81
TRAF1-202ENST00000540010 C8orf59Q8N0T1 100 aaPredicted RBP9.96□□□□□ -0.81
TRAF1-202ENST00000540010 SFRP1Q8N474 314 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 SLC43A3Q8NBI5 491 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 TCF12Q99081 682 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 IGSF9Q9P2J2 1179 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 PRKAG2Q9UGJ0 569 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 SCML2Q9UQR0 700 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 TIMM22Q9Y584 194 aa9.96□□□□□ -0.81
TRAF1-202ENST00000540010 A0A087X1B8 175 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 STX16-NPEPL1H3BU86 382 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 CKMP06732 381 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 CKMT2P17540 419 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 ITGALP20701 1170 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 OR1D2P34982 312 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 GALNT2Q10471 571 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 CNPY1Q3B7I2 92 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 VPS26BQ4G0F5 336 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 RAP1GAP2Q684P5 730 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 TMC5Q6UXY8 1006 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 DENND6AQ8IWF6 608 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 OFCC1Q8IZS5 231 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 ADCY4Q8NFM4 1077 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF483Q8TF39 744 aaPredicted RBP9.96□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM169Q96HH4 297 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 CASD1Q96PB1 797 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 PKMYT1Q99640 499 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 CEP44Q9C0F1 390 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM165Q9HC07 324 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 SSU72Q9NP77 194 aaKnown RBP9.96□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF180Q9UJW8 692 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 FADS3Q9Y5Q0 445 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 MYO9BQ13459 2157 aa9.96□□□□□ -0.82
TRAF1-202ENST00000540010 MYO18AQ92614 2054 aaKnown RBP9.96□□□□□ -0.82
TRAF1-202ENST00000540010 I6L893 689 aaPredicted RBP9.96□□□□□ -0.82
TRAF1-202ENST00000540010 KPNA4O00629 521 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms