RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RFTN1Q14699 578 aaPredicted RBP14.92□□□□□ -0.02
USB1-203ENST00000539737 ANKRD20A8PQ5CZ79 823 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 ATP1A1-AS1Q5TC04 95 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 DENND2CQ68D51 928 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 LRRC49Q8IUZ0 686 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 TP53INP2Q8IXH6 220 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 UNC5BQ8IZJ1 945 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 ATPAF2Q8N5M1 289 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 HCAR2Q8TDS4 363 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 NKD1Q969G9 470 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 ZNF641Q96N77 438 aaPredicted RBP14.92□□□□□ -0.02
USB1-203ENST00000539737 TUBGCP5Q96RT8 1024 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 CINPQ9BW66 212 aaPredicted RBP14.92□□□□□ -0.02
USB1-203ENST00000539737 LACRTQ9GZZ8 138 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 SLC25A18Q9H1K4 315 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 ATP13A3Q9H7F0 1226 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 ETNK2Q9NVF9 386 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 APPL1Q9UKG1 709 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 HYOU1Q9Y4L1 999 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 B3GALT1Q9Y5Z6 326 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 NOTCH2Q04721 2471 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 TRBV23OR9-2A0A075B6M9 112 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 IGHV5-10-1A0A0J9YXX1 117 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 TMX2-CTNND1H3BSU7 103 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 NKX2-8O15522 239 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 PRKAR1AP10644 381 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 TNNT1P13805 278 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 NFKBIAP25963 317 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 SERPINA4P29622 427 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 RENBPP51606 427 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 POLE2P56282 527 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 IL10RBQ08334 325 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 MTM1Q13496 603 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 PAFAH1B3Q15102 231 aaKnown RBP14.91□□□□□ -0.02
USB1-203ENST00000539737 NCBP2-AS2Q69YL0 99 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 BRAT1Q6PJG6 821 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 LRRC8AQ8IWT6 810 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 BBS5Q8N3I7 341 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 TSEN2Q8NCE0 465 aaKnown RBP14.91□□□□□ -0.02
USB1-203ENST00000539737 ATL2Q8NHH9 583 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.91□□□□□ -0.02
USB1-203ENST00000539737 NSMCE1Q8WV22 266 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 RAPGEF5Q92565 580 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 ART4Q93070 314 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 ZNF830Q96NB3 372 aaPredicted RBP14.91□□□□□ -0.02
USB1-203ENST00000539737 ZNF599Q96NL3 588 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 SMIM14Q96QK8 99 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 CTRCQ99895 268 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 CARS2Q9HA77 564 aaKnown RBP14.91□□□□□ -0.02
USB1-203ENST00000539737 GEMIN8Q9NWZ8 242 aaKnown RBP14.91□□□□□ -0.02
USB1-203ENST00000539737 OCIAD1Q9NX40 245 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 PCDHB11Q9Y5F2 797 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 DGKBQ9Y6T7 804 aa14.91□□□□□ -0.02
USB1-203ENST00000539737 MFSD11O43934 449 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 ECEL1O95672 775 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 FGF1P05230 155 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 ZFXP17010 805 aaPredicted RBP14.9□□□□□ -0.02
USB1-203ENST00000539737 NR1D1P20393 614 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 MX2P20592 715 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 GNPDA1P46926 289 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 POLR2LP62875 67 aaKnown RBP14.9□□□□□ -0.02
USB1-203ENST00000539737 BCL2L1Q07817 233 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 KCNAB2Q13303 367 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 TMCO4Q5TGY1 634 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 SLC30A9Q6PML9 568 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 LIPIQ6XZB0 460 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 RFLNAQ6ZTI6 216 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 KATNAL2Q8IYT4 538 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 SYCE1Q8N0S2 351 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 ZSCAN1Q8NBB4 408 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 RBM41Q96IZ5 413 aaKnown RBP14.9□□□□□ -0.02
USB1-203ENST00000539737 RNF157Q96PX1 679 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 MAK16Q9BXY0 300 aaKnown RBP14.9□□□□□ -0.02
USB1-203ENST00000539737 GOLPH3Q9H4A6 298 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 PLAAQ9Y263 795 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 ADGRG1Q9Y653 693 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 DUSP10Q9Y6W6 482 aa14.9□□□□□ -0.02
USB1-203ENST00000539737 PRSS38A1L453 326 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 MACROD2A1Z1Q3 448 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 C3orf70A6NLC5 250 aaPredicted RBP14.89□□□□□ -0.03
USB1-203ENST00000539737 CACNB4O00305 520 aaPredicted RBP14.89□□□□□ -0.03
USB1-203ENST00000539737 PPM1DO15297 605 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 KRT86O43790 486 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 CCDC175P0C221 793 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 CD1CP29017 333 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
USB1-203ENST00000539737 UGT1A3P35503 534 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 KIAA1024LP59773 190 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 GALNT2Q10471 571 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 UBAP2LQ14157 1087 aaKnown RBP14.89□□□□□ -0.03
USB1-203ENST00000539737 ACOX1Q15067 660 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 SNAP47Q5SQN1 464 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 TIGD7Q6NT04 549 aaPredicted RBP14.89□□□□□ -0.03
USB1-203ENST00000539737 DOK6Q6PKX4 331 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 SRLQ86TD4 932 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 PQLC3Q8N755 202 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 LRRC57Q8N9N7 239 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 KIAA1524Q8TCG1 905 aa14.89□□□□□ -0.03
USB1-203ENST00000539737 ZDHHC1Q8WTX9 485 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms