RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 KYAT3Q6YP21 454 aaKnown RBP12.94□□□□□ -0.34
CCDC42-202ENST00000539522 CEP128Q6ZU80 1094 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 ZNF765Q7L2R6 523 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 LINC00523Q86TU6 105 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 PPIL6Q8IXY8 311 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 RAVER1Q8IY67 606 aaKnown RBP12.94□□□□□ -0.34
CCDC42-202ENST00000539522 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 OR2I1PQ8NGU4 316 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 CAVIN3Q969G5 261 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 DNAJC1Q96KC8 554 aaKnown RBP12.94□□□□□ -0.34
CCDC42-202ENST00000539522 SIGLEC10Q96LC7 697 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 RANBP9Q96S59 729 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 GPR63Q9BZJ6 419 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 TRABDQ9H4I3 376 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 ZDHHC18Q9NUE0 388 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 GOLGA6AQ9NYA3 693 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC42-202ENST00000539522 HACD3Q9P035 362 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 KLF15Q9UIH9 416 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 OR1A2Q9Y585 309 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 HS3ST3A1Q9Y663 406 aa12.94□□□□□ -0.34
CCDC42-202ENST00000539522 SPEGQ15772 3267 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 CFAP54Q96N23 3096 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 VILLO15195 856 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 ARNTP27540 789 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 CD38P28907 300 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 ECHS1P30084 290 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 HOXD12P35452 270 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 NUDT1P36639 197 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 CTSKP43235 329 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 NXPH1P58417 271 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 DCDC1P59894 354 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 ACVR1Q04771 509 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 CBLBQ13191 982 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 SGCGQ13326 291 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 FZD2Q14332 565 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 MORF4L2Q15014 288 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 KIF19Q2TAC6 998 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 KHDC1Q4VXA5 237 aaKnown RBP12.93□□□□□ -0.34
CCDC42-202ENST00000539522 PRAMEF14Q5SWL7 426 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 ALS2CLQ60I27 953 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 Q6ZSR6 202 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 HDXQ7Z353 690 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 NLRP8Q86W28 1048 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 NRSN1Q8IZ57 195 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 NDUFAF2Q8N183 169 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 MFSD2AQ8NA29 543 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 AP2M1Q96CW1 435 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 COX14Q96I36 57 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 TEX101Q9BY14 249 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 SUDS3Q9H7L9 328 aaPredicted RBP12.93□□□□□ -0.34
CCDC42-202ENST00000539522 IL21RQ9HBE5 538 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 CHRAC1Q9NRG0 131 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 TREX1Q9NSU2 369 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 FKBPLQ9UIM3 349 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 FNDC3AQ9Y2H6 1198 aaKnown RBP12.93□□□□□ -0.34
CCDC42-202ENST00000539522 TCAF1Q9Y4C2 921 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 SNX11Q9Y5W9 270 aa12.93□□□□□ -0.34
CCDC42-202ENST00000539522 OAS3Q9Y6K5 1087 aaKnown RBP12.93□□□□□ -0.34
CCDC42-202ENST00000539522 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 RGSL1A5PLK6 1076 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 TMEM202A6NGA9 273 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 OR51F1A6NGY5 319 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 AGAP14A8MT82 685 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 TLR4O00206 839 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 ZNF806P0C7X5 589 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 THEGLP0DJG4 465 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 MLNP12872 115 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 LPOP22079 712 aaPredicted RBP12.92□□□□□ -0.34
CCDC42-202ENST00000539522 NMBRP28336 390 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 TEAD1P28347 426 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 AKT2P31751 481 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 LMAN1P49257 510 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 CDKN1CP49918 316 aaPredicted RBP12.92□□□□□ -0.34
CCDC42-202ENST00000539522 AFF3P51826 1226 aaKnown RBP12.92□□□□□ -0.34
CCDC42-202ENST00000539522 TMPRSS15P98073 1019 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 GRIK2Q13002 908 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 EIF2B5Q13144 721 aaKnown RBP12.92□□□□□ -0.34
CCDC42-202ENST00000539522 CHRNA6Q15825 494 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 DUOXA1Q1HG43 343 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 ATP13A5Q4VNC0 1218 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 TRIM61Q5EBN2 209 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 ZNF648Q5T619 568 aaPredicted RBP12.92□□□□□ -0.34
CCDC42-202ENST00000539522 CES3Q6UWW8 571 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 PPP1R21Q6ZMI0 780 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 TRIM74Q86UV6 250 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 HOOK3Q86VS8 718 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 DNAAF3Q8N9W5 541 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 FBXO25Q8TCJ0 367 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
CCDC42-202ENST00000539522 PLEKHG4BQ96PX9 1271 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 FMO2Q99518 471 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 APOOQ9BUR5 198 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 FAM83DQ9H4H8 585 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 AASDHPPTQ9NRN7 309 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 NLE1Q9NVX2 485 aaPredicted RBP12.92□□□□□ -0.34
CCDC42-202ENST00000539522 ANKRD6Q9Y2G4 727 aa12.92□□□□□ -0.34
CCDC42-202ENST00000539522 A6NNZ2 444 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms