RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 PIP5K1BO14986 540 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 KPNA6O60684 536 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 VARSP26640 1264 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 GPR15P49685 360 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SH3BGRP55822 239 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 CLLU1OSQ5K130 101 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 RWDD4Q6NW29 188 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 LYSMD3Q7Z3D4 306 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CCNYL1Q8N7R7 359 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 MDGA1Q8NFP4 955 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 BRSK1Q8TDC3 778 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 TWIST2Q8WVJ9 160 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 LRRC58Q96CX6 371 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 NMD3Q96D46 503 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 SGF29Q96ES7 293 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PNPLA3Q9NST1 481 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 INTS10Q9NVR2 710 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 CIDEBQ9UHD4 219 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CROTQ9UKG9 612 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PCTPQ9UKL6 214 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 AK5Q9Y6K8 562 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 ALPK3Q96L96 1907 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CCDC162PA2VCL2 907 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 LCHNA4D1U4 455 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 STX16O14662 325 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SIX3O95343 332 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 GFAPP14136 432 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 HOXB8P17481 243 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 PSMC3P17980 439 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 RPL10P27635 214 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 DCKP27707 260 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SLC7A2P52569 658 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 MAXP61244 160 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 MBTPS1Q14703 1052 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PTPRCAPQ14761 206 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 TRIP4Q15650 581 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 NRF1Q16656 503 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PARP15Q460N3 678 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PAGE3Q5JUK9 113 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CTSL3PQ5NE16 218 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 OVOS1Q6IE37 1185 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 LAIR2Q6ISS4 152 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 DCP1BQ8IZD4 617 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 TRPC4APQ8TEL6 797 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 FBLIM1Q8WUP2 373 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PHF21BQ96EK2 531 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 DNAJC1Q96KC8 554 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 KLHL5Q96PQ7 755 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 KCNA7Q96RP8 456 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CIB1Q99828 191 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SYT17Q9BSW7 474 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 NPLQ9BXD5 320 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 TRIM54Q9BYV2 358 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SEMA6AQ9H2E6 1030 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CYP4F12Q9HCS2 524 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 RGS18Q9NS28 235 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 GIMAP2Q9UG22 337 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PLXNA2O75051 1894 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 A0A1W2PP18 115 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CCL22O00626 93 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 GPR182O15218 404 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 TMCC1O94876 653 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PRSS56P0CW18 603 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CKMT2P17540 419 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 CST5P28325 142 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 PRDX3P30048 256 aaKnown RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 RFC2P35250 354 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PLK1P53350 603 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 GRSF1Q12849 480 aaKnown RBP eCLIP6.91□□□□□ -1.3
PROM1-219ENST00000539194 LAMB3Q13751 1172 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 Q6ZSR9 355 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PTAR1Q7Z6K3 402 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 GPR180Q86V85 440 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 MYO1HQ8N1T3 1032 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 TTC9BQ8N6N2 239 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 TSPAN14Q8NG11 270 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 OR52E4Q8NGH9 312 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PROKR1Q8TCW9 393 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SPATA17Q96L03 361 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 TBATAQ96M53 351 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 PLEKHG4BQ96PX9 1271 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 FSD1LQ9BXM9 530 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SIK2Q9H0K1 926 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 P2RY12Q9H244 342 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 MUC13Q9H3R2 512 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 UXTQ9UBK9 157 aaPredicted RBP6.91□□□□□ -1.3
PROM1-219ENST00000539194 SLC8A2Q9UPR5 921 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 NDUFAF1Q9Y375 327 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 SPO11Q9Y5K1 396 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 LTBP2Q14767 1821 aa6.91□□□□□ -1.3
PROM1-219ENST00000539194 UBXN8O00124 270 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 TNPO2O14787 897 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 HNRNPRO43390 633 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 TRMUO75648 421 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 RPP40O75818 363 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 CSPG5O95196 566 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 NPPAP01160 153 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 TCN1P20061 433 aaPredicted RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 CD52P31358 61 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 BNIP2Q12982 314 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms