RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KINO60870 393 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 NME6O75414 186 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 DDNO94850 711 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 HOXB2P14652 356 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 AGAP20933 346 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 BMP5P22003 454 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SCP2P22307 547 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MCM3P25205 808 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CHRNA5P30532 468 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 GCH1P30793 250 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CCKBRP32239 447 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CLCNKBP51801 687 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 F2RL1P55085 397 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 YBEYP58557 167 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SEC61BP60468 96 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CDKL1Q00532 357 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ARHGAP1Q07960 439 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SREBF2Q12772 1141 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 LASP1Q14847 261 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 NAA25Q14CX7 972 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 RNPS1Q15287 305 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 NAB2Q15742 525 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 DECR1Q16698 335 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 FAM153CQ494X1 144 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 LBHQ53QV2 105 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 GPR139Q6DWJ6 353 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 MIS18BP1Q6P0N0 1132 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 CD164L2Q6UWJ8 174 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 IRF2BP2Q7Z5L9 587 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 KBTBD6Q86V97 674 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM200AQ86VY9 491 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SRRM1Q8IYB3 904 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM99Q8N816 258 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 HMGCLL1Q8TB92 370 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ERGIC1Q969X5 290 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ADAD1Q96M93 576 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ASCL2Q99929 193 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SLF1Q9BQI6 1058 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 KRT23Q9C075 422 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 OR10A4Q9H209 315 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZBTB20Q9HC78 741 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SPAG4Q9NPE6 437 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 FZD3Q9NPG1 666 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF701Q9NV72 531 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 PAG1Q9NWQ8 432 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 ELF5Q9UKW6 265 aaPredicted RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 NFE2L3Q9Y4A8 694 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 WDR33Q9C0J8 1336 aaKnown RBP1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SYNRGQ9UMZ2 1314 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 SNAPC4Q5SXM2 1469 aa1.07□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3DA0A087WVF3 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3IA0A087WXS9 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3EA0A087X179 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3KA0A087X1G2 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ILVBLA1L0T0 632 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3BA6NDS4 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3FA6NER0 549 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CGB1A6NKQ9 187 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3LB9A6J9 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 AKR1B15C9JRZ8 316 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 E5RJQ4 531 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 H3BQ06 376 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 I6L893 689 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SH2B2O14492 632 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CEP104O60308 925 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 RTN2O75298 545 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SLC22A3O75751 556 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 BBOX1O75936 387 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PDE9AO76083 593 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DDAH2O95865 285 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 GALTP07902 379 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SLC3A2P08195 630 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 INHBAP08476 426 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FGF2P09038 288 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3HP0C7X1 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 FAM157CP0CG43 387 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CSH1P0DML2 217 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CSH2P0DML3 217 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CYP4B1P13584 511 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SAT1P21673 171 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 UGT1A1P22309 533 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DPP4P27487 766 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ACADLP28330 430 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 SLC8A1P32418 973 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PRCPP42785 496 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 CDX1P47902 265 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 LMAN1P49257 510 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 ALDH7A1P49419 539 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PDE1AP54750 535 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 BPIFB3P59826 476 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 UBXN2AP68543 259 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 MVPQ14764 893 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 INPP5JQ15735 1006 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 DUSP6Q16828 381 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 HECTD2Q5U5R9 776 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PAPD7Q5XG87 772 aaKnown RBP1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3GQ6DHY5 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TBC1D3CQ6IPX1 549 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM71Q6P5X7 295 aa1.06□□□□□ -2.24
HIF1A-204ENST00000539097 PRSS55Q6UWB4 352 aaPredicted RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms