RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SPRYD7Q5W111 196 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 ABRAXAS1Q6UWZ7 409 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 OR7A2PQ8NGA2 310 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 MCRS1Q96EZ8 462 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 FAM83DQ9H4H8 585 aa16.77■□□□□ 0.28
SCARB1-205ENST00000538291 DDX18Q9NVP1 670 aaKnown RBP16.77■□□□□ 0.28
SCARB1-205ENST00000538291 UBE2QL1A1L167 161 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 HOXB6P17509 224 aaKnown RBP16.77■□□□□ 0.27
SCARB1-205ENST00000538291 TEAD4Q15561 434 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 RFX4Q33E94 735 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 IRGCQ6NXR0 463 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 AHI1Q8N157 1196 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 HERVK_113Q902F9 699 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 PSMD13Q9UNM6 376 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 SEPT4O43236 478 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 SERPINA6P08185 405 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 CDH4P55283 916 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 IL17AQ16552 155 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 EML3Q32P44 896 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 RNF43Q68DV7 783 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 DUPD1Q68J44 220 aa16.77■□□□□ 0.27
SCARB1-205ENST00000538291 PTCD2Q8WV60 388 aaKnown RBP16.77■□□□□ 0.27
SCARB1-205ENST00000538291 PCCBP05166 539 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 ALAS2P22557 587 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 OMPP47874 163 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 PRMT2P55345 433 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 RTL4Q6ZR62 310 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 ANKS1BQ7Z6G8 1248 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CUZD1Q86UP6 607 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 KBTBD8Q8NFY9 601 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 COMMD9Q9P000 198 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 A0A1B0GVM2 712 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 TCAF2A6NFQ2 919 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CLDN4O14493 209 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 C22orf31O95567 290 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CCNE2O96020 404 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 MMP8P22894 467 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 MASP1P48740 699 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 ACBD6Q9BR61 282 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CDADC1Q9BWV3 514 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 BTBD3Q9Y2F9 522 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 TRBV23OR9-2A0A075B6M9 112 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 GIMD1P0DJR0 217 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CMPK1P30085 196 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 ZNF132P52740 706 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 PTGES3Q15185 160 aaKnown RBP16.76■□□□□ 0.27
SCARB1-205ENST00000538291 HECTD2Q5U5R9 776 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 RFWD3Q6PCD5 774 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 DHDDSQ86SQ9 333 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 OAFQ86UD1 273 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 XYLT1Q86Y38 959 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 DQX1Q8TE96 717 aaKnown RBP16.76■□□□□ 0.27
SCARB1-205ENST00000538291 RCN3Q96D15 328 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CDH19Q9H159 772 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 KCNN2Q9H2S1 579 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 EPB41L1Q9H4G0 881 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 ZNF490Q9ULM2 529 aaPredicted RBP16.76■□□□□ 0.27
SCARB1-205ENST00000538291 NDRG2Q9UN36 371 aaKnown RBP16.76■□□□□ 0.27
SCARB1-205ENST00000538291 TSPAN1O60635 241 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 UGT2B17O75795 530 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CDH3P22223 829 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 GNPDA1P46926 289 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CMC1Q7Z7K0 106 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 TMC8Q8IU68 726 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 NRSN1Q8IZ57 195 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 STYXQ8WUJ0 223 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 NIFKQ9BYG3 293 aaKnown RBP16.76■□□□□ 0.27
SCARB1-205ENST00000538291 NOL6Q9H6R4 1146 aaKnown RBP16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CAB39LQ9H9S4 337 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 NMUR1Q9HB89 426 aa16.76■□□□□ 0.27
SCARB1-205ENST00000538291 MAGEB3O15480 346 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 DHX15O43143 795 aaKnown RBP16.75■□□□□ 0.27
SCARB1-205ENST00000538291 POP4O95707 220 aaKnown RBP16.75■□□□□ 0.27
SCARB1-205ENST00000538291 TIGD2Q4W5G0 525 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 SPATA19Q7Z5L4 167 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 SFRP1Q8N474 314 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 APOLD1Q96LR9 279 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 QKIQ96PU8 341 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCARB1-205ENST00000538291 CPXM1Q96SM3 734 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 HBS1LQ9Y450 684 aaKnown RBP16.75■□□□□ 0.27
SCARB1-205ENST00000538291 TMEM131LA2VDJ0 1609 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 LGR5O75473 907 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 NR2F6P10588 404 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 ASMTP46597 345 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 IRF2BP2Q7Z5L9 587 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 TSSK3Q96PN8 268 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 EQTNQ9NQ60 294 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 OGDHLQ9ULD0 1010 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 ADGRB1O14514 1584 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 DHRS12A0PJE2 317 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 FAM86C2PA6NEL3 165 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 RHPN2P1A8MT19 583 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 TRAFD1O14545 582 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-205ENST00000538291 CAP1Q01518 475 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 CRY2Q49AN0 593 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 TCF25Q9BQ70 676 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 PIGUQ9H490 435 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms