RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TMEM9Q9P0T7 183 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 BTNL10A8MVZ5 291 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 OR10H3O60404 316 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 GRK5P34947 590 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 ADIGQ0VDE8 80 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 VMACQ2NL98 169 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 INTS11Q5TA45 600 aaKnown RBP5.65□□□□□ -1.5
CSMD1-215ENST00000537824 NPNTQ6UXI9 565 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 CCDC107Q8WV48 283 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 TRIM2Q9C040 744 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 MAGEL2Q9UJ55 1249 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 YARS2Q9Y2Z4 477 aaKnown RBP5.65□□□□□ -1.5
CSMD1-215ENST00000537824 LRRC10BA6NIK2 292 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 EML1O00423 815 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 TGDSO95455 350 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 CHRM5P08912 532 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-215ENST00000537824 SLC2A3P11169 496 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 SLC7A1P30825 629 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 CBLBQ13191 982 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 KCNT2Q6UVM3 1135 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 GLT1D1Q96MS3 346 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 OR52E6Q96RD3 313 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 LRRC19Q9H756 370 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 PAQR5Q9NXK6 330 aaPredicted RBP5.65□□□□□ -1.5
CSMD1-215ENST00000537824 KCTD5Q9NXV2 234 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF69Q9UC07 566 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 KLQ9UEF7 1012 aa5.65□□□□□ -1.5
CSMD1-215ENST00000537824 C5orf51A6NDU8 294 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 CSF2P04141 144 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 CRATP43155 626 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF772Q68DY9 489 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 CRTC1Q6UUV9 634 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PIWIL4Q7Z3Z4 852 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PHOX2BQ99453 314 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PKP2Q99959 881 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 AIF1LQ9BQI0 150 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 LPIN3Q9BQK8 851 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 DPCDQ9BVM2 203 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PRKD2Q9BZL6 878 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ALG2Q9H553 416 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 RBM22Q9NW64 420 aaKnown RBP eCLIP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 CFL2Q9Y281 166 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 DISC1C4P0D8 188 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 APOC3P02656 99 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 NR2F6P10588 404 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ERP29P30040 261 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 NUMBP49757 651 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ARHGAP15Q53QZ3 475 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 LAPTM4BQ86VI4 370 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 OR10H4Q8NGA5 316 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 OR52K1Q8NGK4 314 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PANX3Q96QZ0 392 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 TSNAXQ99598 290 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 RIOK2Q9BVS4 552 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 C5orf60A6NFR6 353 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 RNF225M0QZC1 329 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 LTA4HP09960 611 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PABPC4LP0CB38 370 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 COL6A1P12109 1028 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF3P17036 446 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 NAE1Q13564 534 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 TOR1AIP1Q5JTV8 583 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 HYIQ5T013 277 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 IL23RQ5VWK5 629 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 FAM156AQ8NDB6 213 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 GPR156Q8NFN8 814 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 OR2T12Q8NG77 320 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 MTFMTQ96DP5 389 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 FNDC11Q9BVV2 318 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 YTHDF1Q9BYJ9 559 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PRDM16Q9HAZ2 1276 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 MRPL42Q9Y6G3 142 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 KANTRA0A1W2PQU2 76 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 KDELR1P24390 212 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 SNRPD2P62316 118 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ACSM2AQ08AH3 577 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ACSM2BQ68CK6 577 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF410Q86VK4 478 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 METTL25Q8N6Q8 603 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 SERAC1Q96JX3 654 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 LENG8Q96PV6 779 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ASB2Q96Q27 587 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 SAE1Q9UBE0 346 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 C1orf196B1AJZ1 125 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 KCNA6P17658 529 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 RPL22P35268 128 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 BUD31P41223 144 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 MARSP56192 900 aaKnown RBP5.65□□□□□ -1.51
CSMD1-215ENST00000537824 UGT8Q16880 541 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 SLC2A7Q6PXP3 512 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 USP30Q70CQ3 517 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF639Q9UID6 485 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 POMPQ9Y244 141 aa5.65□□□□□ -1.51
CSMD1-215ENST00000537824 CREB1P16220 341 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MAMLD1Q13495 774 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TLR1Q15399 786 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 NPTX1Q15818 432 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CRY1Q16526 586 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms