RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 E2F4Q16254 413 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 UGP2Q16851 508 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 B3GNTL1Q67FW5 361 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-217ENST00000537162 FAM198BQ6UWH4 519 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 FAM92BQ6ZTR7 304 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 BEND5Q7L4P6 421 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 KLHL6Q8WZ60 621 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 NT5C1BQ96P26 610 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 AGAP3Q96P47 875 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 ZNF559Q9BR84 538 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 TEX101Q9BY14 249 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 NLNQ9BYT8 704 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 WASH6PQ9NQA3 447 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 RARRES3Q9UL19 164 aa9.37□□□□□ -0.91
CPSF7-217ENST00000537162 PCM1Q15154 2024 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 PKD1L1Q8TDX9 2849 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 ILVBLA1L0T0 632 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 DRGXA6NNA5 263 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 A8MX80 341 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 ALOX12BO75342 701 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 EBLN1P0CF75 366 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 ESRRAP11474 423 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 NELFEP18615 380 aaKnown RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 XPAP23025 273 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 SCNN1AP37088 669 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 STAT6P42226 847 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 PPP1CAP62136 330 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 SNRPD1P62314 119 aaKnown RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 PDE1BQ01064 536 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 GNA12Q03113 381 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 DSG2Q14126 1118 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 KNOP1Q1ED39 458 aaKnown RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 PLEKHS1Q5SXH7 462 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 CACHD1Q5VU97 1274 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 FCRL6Q6DN72 434 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 DOK6Q6PKX4 331 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 IGFL2Q6UWQ7 119 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 LIPIQ6XZB0 460 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 SLC9A9Q8IVB4 645 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 CLEC1AQ8NC01 280 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 HSFY1Q96LI6 401 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 MAGEB10Q96LZ2 347 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 POPDC2Q9HBU9 364 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 SLC39A2Q9NP94 309 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 DNAJB12Q9NXW2 375 aaKnown RBP9.36□□□□□ -0.91
CPSF7-217ENST00000537162 TBC1D29Q9UFV1 150 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 SLC17A4Q9Y2C5 497 aa9.36□□□□□ -0.91
CPSF7-217ENST00000537162 IGHV5-51A0A0C4DH38 117 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 RNF225M0QZC1 329 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 TOX3O15405 576 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 CPNE3O75131 537 aaKnown RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 IVLP07476 585 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 SLC2A3P11169 496 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 CASP1P29466 404 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 HOXC12P31275 282 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 RPL34P49207 117 aaKnown RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 FOXL2P58012 376 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 YWHAZP63104 245 aaKnown RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 HMGN5P82970 282 aaKnown RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 NME3Q13232 169 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 POLD3Q15054 466 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 PCOLCEQ15113 449 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 PRKD1Q15139 912 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 OTUD1Q5VV17 481 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 IYDQ6PHW0 289 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 PRSS42Q7Z5A4 293 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 DRC7Q8IY82 874 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 DEFB106AQ8N104 65 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 UBR7Q8N806 425 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 OR2M4Q96R27 311 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 CGNQ9P2M7 1197 aaKnown RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 FBXO2Q9UK22 296 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-217ENST00000537162 TMEM98Q9Y2Y6 226 aa9.35□□□□□ -0.91
CPSF7-217ENST00000537162 TSPAN11A1L157 253 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 MEN1O00255 615 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 PDE2AO00408 941 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-217ENST00000537162 SLC19A2O60779 497 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 CUTAO60888 179 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 SCRG1O75711 98 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 DNASE1P24855 282 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 ERCC5P28715 1186 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-217ENST00000537162 NEK4P51957 841 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 SOX8P57073 446 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 CDK3Q00526 305 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 PYCR3Q53H96 274 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 RPUSD3Q6P087 351 aaKnown RBP9.34□□□□□ -0.91
CPSF7-217ENST00000537162 MARK2Q7KZI7 788 aaKnown RBP9.34□□□□□ -0.91
CPSF7-217ENST00000537162 TRIM74Q86UV6 250 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 RAB43Q86YS6 212 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 TTC39CQ8N584 583 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 PDILTQ8N807 584 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 DNAAF3Q8N9W5 541 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 RSC1A1Q92681 617 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 EXOC2Q96KP1 924 aa9.34□□□□□ -0.91
CPSF7-217ENST00000537162 GDAP1L1Q96MZ0 367 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms